RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TMEM185BQ9H7F4 350 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 AUNIPQ9H7T9 357 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CALHM2Q9HA72 323 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ZFP14Q9HCL3 533 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 MRPL22Q9NWU5 206 aaKnown RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 PSMC3IPQ9P2W1 217 aaPredicted RBP2.19□□□□□ -2.06
SPG11-206ENST00000558093 ATXN10Q9UBB4 475 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 PISDQ9UG56 409 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 ZNF229Q9UJW7 825 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 TBC1D24Q9ULP9 559 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 CHMP2BQ9UQN3 213 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 NINLQ9Y2I6 1382 aa2.19□□□□□ -2.06
SPG11-206ENST00000558093 SF3B1O75533 1304 aaKnown RBP eCLIP2.18□□□□□ -2.06
SPG11-206ENST00000558093 A0A0J9YYE9 177 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SAGE2PA6NJ88 616 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 H3BQV1 296 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 HAS3O00219 553 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 IMPA2O14732 288 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TM9SF1O15321 606 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CHMP2AO43633 222 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CYTH3O43739 400 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 FCMRO60667 390 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 JAK2O60674 1132 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SCN2BO60939 215 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TM7SF2O76062 418 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 UFL1O94874 794 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SEMA3DO95025 777 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CCNB2O95067 398 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TRBC1P01850 177 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SEMG1P04279 462 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CA3P07451 260 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 PNMTP11086 282 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MLNP12872 115 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CCL2P13500 99 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 NQO2P16083 231 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TNNI3P19429 210 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TPSB2P20231 275 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 NT5EP21589 574 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ADORA2BP29275 332 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CDH5P33151 784 aaPredicted RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 CD80P33681 288 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ADRA1AP35348 466 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CHI3L1P36222 383 aaPredicted RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 SPAM1P38567 509 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GRIA1P42261 906 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 HTR5AP47898 357 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CDC34P49427 236 aaPredicted RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 CASP4P49662 377 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 RAB14P61106 215 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 RND3P61587 244 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 RPL23AP62750 156 aaKnown RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 CBX1P83916 185 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 BDH1Q02338 343 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 IRF8Q02556 426 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MADCAM1Q13477 382 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ART3Q13508 389 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 RCAN2Q14206 197 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TGFBIQ15582 683 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TPSAB1Q15661 275 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MAPK6Q16659 721 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 RGS21Q2M5E4 152 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ADPRMQ3LIE5 342 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CLEC6AQ6EIG7 209 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ASPHD2Q6ICH7 369 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ZSCAN25Q6NSZ9 544 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CXCL17Q6UXB2 119 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SYT10Q6XYQ8 523 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 COPS6Q7L5N1 327 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 DCXRQ7Z4W1 244 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 LUZP2Q86TE4 346 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CYP4Z1Q86W10 505 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 PPP1R27Q86WC6 154 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 BPIFB2Q8N4F0 458 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CCNYL1Q8N7R7 359 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 FAM71CQ8NEG0 241 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 NFAM1Q8NET5 270 aaPredicted RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 OR8J2Q8NGG1 315 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 UBA3Q8TBC4 463 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TEX47Q8TBZ9 253 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GPX8Q8TED1 209 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GLYATL2Q8WU03 294 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 CACNG8Q8WXS5 425 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TOP1MTQ969P6 601 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MRGPRFQ96AM1 343 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SENP8Q96LD8 212 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GPA33Q99795 319 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 TMEM43Q9BTV4 400 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 FICDQ9BVA6 458 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 HINT2Q9BX68 163 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ANKRD60Q9BZ19 345 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ATG10Q9H0Y0 220 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 OR51J1Q9H342 316 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GLIPR2Q9H4G4 154 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 GEMIN7Q9H840 131 aaKnown RBP2.18□□□□□ -2.06
SPG11-206ENST00000558093 WDR76Q9H967 626 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 MEAF6Q9HAF1 191 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ZNF160Q9HCG1 818 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 APMAPQ9HDC9 416 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 SLC40A1Q9NP59 571 aa2.18□□□□□ -2.06
SPG11-206ENST00000558093 ZNF331Q9NQX6 463 aaPredicted RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms