RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 IGHMP01871 453 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 ZNF3P17036 446 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 DAP3P51398 398 aaKnown RBP15.09■□□□□ 0.01
SNX1-203ENST00000558040 P2RY4P51582 365 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 SNRPGP62308 76 aaKnown RBP15.09■□□□□ 0.01
SNX1-203ENST00000558040 ERVK-25P63136 954 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 TEKQ02763 1124 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 CD47Q08722 323 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 TOP3AQ13472 1001 aaPredicted RBP15.09■□□□□ 0.01
SNX1-203ENST00000558040 C1DQ13901 141 aaKnown RBP15.09■□□□□ 0.01
SNX1-203ENST00000558040 MAD2L1BPQ15013 274 aaPredicted RBP15.09■□□□□ 0.01
SNX1-203ENST00000558040 MS4A18Q3C1V0 323 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 FAM205BPQ63HN1 556 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 HDDC2Q7Z4H3 204 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 GHDCQ8N2G8 530 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 LSM14AQ8ND56 463 aaKnown RBP15.09■□□□□ 0.01
SNX1-203ENST00000558040 WDYHV1Q96HA8 205 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 GPR137Q96N19 417 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 TXNIPQ9H3M7 391 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 CMC2Q9NRP2 79 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 RASSF1Q9NS23 344 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 CAMK2AQ9UQM7 478 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 ADAM18Q9Y3Q7 739 aa15.09■□□□□ 0.01
SNX1-203ENST00000558040 PRKYO43930 277 aa15.08■□□□□ 0
SNX1-203ENST00000558040 SERPINI2O75830 405 aa15.08■□□□□ 0
SNX1-203ENST00000558040 TXNDC12O95881 172 aa15.08■□□□□ 0
SNX1-203ENST00000558040 PLGP00747 810 aaPredicted RBP15.08■□□□□ 0
SNX1-203ENST00000558040 ZNF43P17038 809 aa15.08■□□□□ 0
SNX1-203ENST00000558040 PAICSP22234 425 aaKnown RBP15.08■□□□□ 0
SNX1-203ENST00000558040 RPL27P61353 136 aaKnown RBP15.08■□□□□ 0
SNX1-203ENST00000558040 HSF1Q00613 529 aa15.08■□□□□ 0
SNX1-203ENST00000558040 POU3F1Q03052 451 aaPredicted RBP15.08■□□□□ 0
SNX1-203ENST00000558040 POU4F3Q15319 338 aa15.08■□□□□ 0
SNX1-203ENST00000558040 SLC35F1Q5T1Q4 408 aa15.08■□□□□ 0
SNX1-203ENST00000558040 FAM122BQ7Z309 247 aa15.08■□□□□ 0
SNX1-203ENST00000558040 GPAT4Q86UL3 456 aa15.08■□□□□ 0
SNX1-203ENST00000558040 JAZF1Q86VZ6 243 aa15.08■□□□□ 0
SNX1-203ENST00000558040 TCEANCQ8N8B7 351 aa15.08■□□□□ 0
SNX1-203ENST00000558040 RHOXF1Q8NHV9 184 aa15.08■□□□□ 0
SNX1-203ENST00000558040 TMEM163Q8TC26 289 aa15.08■□□□□ 0
SNX1-203ENST00000558040 FBLIM1Q8WUP2 373 aa15.08■□□□□ 0
SNX1-203ENST00000558040 Q96MT0 163 aa15.08■□□□□ 0
SNX1-203ENST00000558040 IL4I1Q96RQ9 567 aa15.08■□□□□ 0
SNX1-203ENST00000558040 SF3B5Q9BWJ5 86 aaKnown RBP15.08■□□□□ 0
SNX1-203ENST00000558040 PRDM14Q9GZV8 571 aa15.08■□□□□ 0
SNX1-203ENST00000558040 FN3KQ9H479 309 aa15.08■□□□□ 0
SNX1-203ENST00000558040 CLN6Q9NWW5 311 aa15.08■□□□□ 0
SNX1-203ENST00000558040 ZNF226Q9NYT6 803 aa15.08■□□□□ 0
SNX1-203ENST00000558040 IGHV3-15A0A0B4J1V0 119 aa15.07■□□□□ 0
SNX1-203ENST00000558040 TEX13CA0A0J9YWL9 993 aa15.07■□□□□ 0
SNX1-203ENST00000558040 A0A1B0GTH9 108 aa15.07■□□□□ 0
SNX1-203ENST00000558040 A6NIZ1 184 aa15.07■□□□□ 0
SNX1-203ENST00000558040 ZNF814B7Z6K7 855 aa15.07■□□□□ 0
SNX1-203ENST00000558040 NPIPA2E9PIF3 369 aa15.07■□□□□ 0
SNX1-203ENST00000558040 NPIPA3F8WFD2 350 aa15.07■□□□□ 0
SNX1-203ENST00000558040 M0R129 80 aa15.07■□□□□ 0
SNX1-203ENST00000558040 XKRYO14609 159 aa15.07■□□□□ 0
SNX1-203ENST00000558040 SMAD9O15198 467 aaKnown RBP15.07■□□□□ 0
SNX1-203ENST00000558040 TLX2O43763 284 aaPredicted RBP15.07■□□□□ 0
SNX1-203ENST00000558040 BCL10O95999 233 aa15.07■□□□□ 0
SNX1-203ENST00000558040 MLLT10P55197 1068 aa15.07■□□□□ 0
SNX1-203ENST00000558040 RAP1BP61224 184 aa15.07■□□□□ 0
SNX1-203ENST00000558040 RAP1AP62834 184 aa15.07■□□□□ 0
SNX1-203ENST00000558040 KRR1Q13601 381 aaKnown RBP15.07■□□□□ 0
SNX1-203ENST00000558040 ACKR1Q16570 336 aa15.07■□□□□ 0
SNX1-203ENST00000558040 SLC25A30Q5SVS4 291 aa15.07■□□□□ 0
SNX1-203ENST00000558040 MEDAGQ5VYS4 303 aa15.07■□□□□ 0
SNX1-203ENST00000558040 SLC35D2Q76EJ3 337 aa15.07■□□□□ 0
SNX1-203ENST00000558040 FCRLAQ7L513 359 aa15.07■□□□□ 0
SNX1-203ENST00000558040 ADCK1Q86TW2 530 aa15.07■□□□□ 0
SNX1-203ENST00000558040 CCDC103Q8IW40 242 aa15.07■□□□□ 0
SNX1-203ENST00000558040 KDM8Q8N371 416 aa15.07■□□□□ 0
SNX1-203ENST00000558040 FAM26EQ8N5C1 309 aa15.07■□□□□ 0
SNX1-203ENST00000558040 CISD2Q8N5K1 135 aaKnown RBP15.07■□□□□ 0
SNX1-203ENST00000558040 ARIH2OSQ8N7S6 290 aa15.07■□□□□ 0
SNX1-203ENST00000558040 CNIH3Q8TBE1 160 aa15.07■□□□□ 0
SNX1-203ENST00000558040 FAR1Q8WVX9 515 aa15.07■□□□□ 0
SNX1-203ENST00000558040 ZNF845Q96IR2 970 aaPredicted RBP15.07■□□□□ 0
SNX1-203ENST00000558040 Q96M85 177 aa15.07■□□□□ 0
SNX1-203ENST00000558040 TSPAN32Q96QS1 320 aa15.07■□□□□ 0
SNX1-203ENST00000558040 NR1H4Q96RI1 486 aaPredicted RBP15.07■□□□□ 0
SNX1-203ENST00000558040 UCN2Q96RP3 112 aa15.07■□□□□ 0
SNX1-203ENST00000558040 PRRG4Q9BZD6 226 aa15.07■□□□□ 0
SNX1-203ENST00000558040 UBAP1Q9NZ09 502 aa15.07■□□□□ 0
SNX1-203ENST00000558040 B3GAT1Q9P2W7 334 aa15.07■□□□□ 0
SNX1-203ENST00000558040 ZNF346Q9UL40 294 aaKnown RBP15.07■□□□□ 0
SNX1-203ENST00000558040 ZFHX4Q86UP3 3567 aa15.07■□□□□ 0
SNX1-203ENST00000558040 SNTNA6NMZ2 147 aa15.06■□□□□ 0
SNX1-203ENST00000558040 CYTIPO60759 359 aa15.06■□□□□ 0
SNX1-203ENST00000558040 IFNGR1P15260 489 aa15.06■□□□□ 0
SNX1-203ENST00000558040 HIST1H1CP16403 213 aaKnown RBP15.06■□□□□ 0
SNX1-203ENST00000558040 GABRB1P18505 474 aa15.06■□□□□ 0
SNX1-203ENST00000558040 ACVR2AP27037 513 aa15.06■□□□□ 0
SNX1-203ENST00000558040 CHN2P52757 468 aa15.06■□□□□ 0
SNX1-203ENST00000558040 CSNK2BP67870 215 aa15.06■□□□□ 0
SNX1-203ENST00000558040 EFNB1P98172 346 aa15.06■□□□□ 0
SNX1-203ENST00000558040 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.06■□□□□ 0
SNX1-203ENST00000558040 CDK5R2Q13319 367 aa15.06■□□□□ 0
SNX1-203ENST00000558040 SF3B4Q15427 424 aaKnown RBP eCLIP15.06■□□□□ 0
SNX1-203ENST00000558040 C3AR1Q16581 482 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms