RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 MS4A18H0YCH9 400 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 CH25HO95992 272 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 IGF2P01344 180 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 MT-ND1P03886 318 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 NCK1P16333 377 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 PTNP21246 168 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 MPGP29372 298 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
SLIRP-211ENST00000557623 PUDPQ08623 228 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 TAB1Q15750 504 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 STK11Q15831 433 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 FXNQ16595 210 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 MS4A18Q3C1V0 323 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 C1QTNF12Q5T7M4 302 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 C22orf34Q6ZV56 151 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 VTCN1Q7Z7D3 282 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 CYP4Z1Q86W10 505 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 NKAIN4Q8IVV8 208 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 DEFB107AQ8IZN7 70 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 RNF148Q8N7C7 305 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 PLPP7Q8NBV4 271 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 C1orf162Q8NEQ5 155 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-211ENST00000557623 BCAS4Q8TDM0 211 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 TMEM239Q8WW34 195 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 NINJ1Q92982 152 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 HSH2DQ96JZ2 352 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 FNDC11Q9BVV2 318 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 LINC00470Q9BZP3 86 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 AMBRA1Q9C0C7 1298 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 GORASP2Q9H8Y8 452 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 DCAF13Q9NV06 445 aaKnown RBP11.01□□□□□ -0.65
SLIRP-211ENST00000557623 B3GAT1Q9P2W7 334 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 SEC14L4Q9UDX3 406 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 CD300AQ9UGN4 299 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 ZNF229Q9UJW7 825 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 A4GNTQ9UNA3 340 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 MED31Q9Y3C7 131 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 NOX1Q9Y5S8 564 aa11.01□□□□□ -0.65
SLIRP-211ENST00000557623 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11□□□□□ -0.65
SLIRP-211ENST00000557623 OR5H1A6NKK0 313 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 POM121CA8CG34 1229 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 LRRN3E7EW58 273 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 PDLIM1O00151 329 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 KPNA4O00629 521 aaPredicted RBP11□□□□□ -0.65
SLIRP-211ENST00000557623 PLPP3O14495 311 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 KLF4O43474 513 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 SLC43A1O75387 559 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 RAD51DO75771 328 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ITGA5P08648 1049 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ADORA3P0DMS8 318 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 UMPSP11172 480 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 TCN1P20061 433 aaPredicted RBP11□□□□□ -0.65
SLIRP-211ENST00000557623 AHCYP23526 432 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 SELENOPP49908 381 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ZP4Q12836 540 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 PPA1Q15181 289 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 PXKQ7Z7A4 578 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 OFCC1Q8IZS5 231 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ARHGAP24Q8N264 748 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 TMEM255BQ8WV15 326 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 MUS81Q96NY9 551 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ESRP2Q9H6T0 727 aaKnown RBP11□□□□□ -0.65
SLIRP-211ENST00000557623 FAM32AQ9Y421 112 aaKnown RBP11□□□□□ -0.65
SLIRP-211ENST00000557623 CENPEQ02224 2701 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ITPR2Q14571 2701 aa11□□□□□ -0.65
SLIRP-211ENST00000557623 ZNF726A6NNF4 738 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 ENO4A6NNW6 628 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 TRAF3IP2O43734 574 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-211ENST00000557623 ZNF432O94892 652 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 ASAH2BP0C7U1 165 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 HOXC12P31275 282 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 UGT2B15P54855 530 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 POU3F1Q03052 451 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-211ENST00000557623 TRAM2Q15035 370 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 GABRA6Q16445 453 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 ALKBH2Q6NS38 261 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 HMBOX1Q6NT76 420 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 NANOGNBQ7Z5D8 188 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 GPR137CQ8N3F9 429 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 FAM156AQ8NDB6 213 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 RBM15BQ8NDT2 890 aaKnown RBP10.99□□□□□ -0.65
SLIRP-211ENST00000557623 PIK3C3Q8NEB9 887 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 SGTBQ96EQ0 304 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 PLPPR2Q96GM1 343 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 NSMCE2Q96MF7 247 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 PLEKHF2Q9H8W4 249 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 MEPEQ9NQ76 525 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-211ENST00000557623 ST6GALNAC2Q9UJ37 374 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 SNX13Q9Y5W8 968 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 ENPP4Q9Y6X5 453 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 RAI1Q7Z5J4 1906 aaPredicted RBP10.99□□□□□ -0.65
SLIRP-211ENST00000557623 APCP25054 2843 aa10.99□□□□□ -0.65
SLIRP-211ENST00000557623 C11orf98E9PRG8 122 aa10.98□□□□□ -0.65
SLIRP-211ENST00000557623 J3KTA2 159 aa10.98□□□□□ -0.65
SLIRP-211ENST00000557623 RNF13O43567 381 aa10.98□□□□□ -0.65
SLIRP-211ENST00000557623 OR7A10O76100 309 aa10.98□□□□□ -0.65
SLIRP-211ENST00000557623 HPRP00739 348 aa10.98□□□□□ -0.65
SLIRP-211ENST00000557623 ITGA2P17301 1181 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms