RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 OR1K1Q8NGR3 316 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 WDR60Q8WVS4 1066 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 AURKBQ96GD4 344 aaPredicted RBP7.52□□□□□ -1.21
VRK1-206ENST00000557222 ANKRD27Q96NW4 1050 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 SLC35A5Q9BS91 424 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 TAPBPLQ9BX59 468 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 CHODLQ9H9P2 273 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 RASD1Q9Y272 281 aa7.52□□□□□ -1.21
VRK1-206ENST00000557222 ZC3H12DA2A288 527 aaKnown RBP7.51□□□□□ -1.21
VRK1-206ENST00000557222 CLDN24A6NM45 220 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 AP3D1O14617 1153 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 BIRC5O15392 142 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 TCF21O43680 179 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 TYROBPO43914 113 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 FZD7O75084 574 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 LY6HO94772 140 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 AKR7A3O95154 331 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 IGKV3-15P01624 115 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 SERPINE1P05121 402 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 TFPTP0C1Z6 253 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 OR4A8P0C604 315 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 CCNA2P20248 432 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 EVX1P49640 407 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 P2RY4P51582 365 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 COPZ1P61923 177 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 NAAAQ02083 359 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 CEACAM7Q14002 265 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 ADIPOQQ15848 244 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 CR1LQ2VPA4 569 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 HIKESHIQ53FT3 197 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 MRPL2Q5T653 305 aaKnown RBP7.51□□□□□ -1.21
VRK1-206ENST00000557222 WBP2NLQ6ICG8 309 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 DEF8Q6ZN54 512 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 CREB3L2Q70SY1 520 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 ANKRD46Q86W74 232 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 NUDCD3Q8IVD9 361 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 PEX5LQ8IYB4 626 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 GSPT2Q8IYD1 628 aaKnown RBP7.51□□□□□ -1.21
VRK1-206ENST00000557222 ZNF786Q8N393 782 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 TMEM99Q8N816 258 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 LINC01356Q8N9X3 169 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 ZFAND2BQ8WV99 257 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 SLC35B4Q969S0 331 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 ZNF385AQ96PM9 386 aaKnown RBP7.51□□□□□ -1.21
VRK1-206ENST00000557222 DIRC2Q96SL1 478 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 DOK1Q99704 481 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 VRK1Q99986 396 aaPredicted RBP7.51□□□□□ -1.21
VRK1-206ENST00000557222 BPESC1Q9GZL8 116 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 CALML5Q9NZT1 146 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 HAO1Q9UJM8 370 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 RCE1Q9Y256 329 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 RAP2CQ9Y3L5 183 aa7.51□□□□□ -1.21
VRK1-206ENST00000557222 CDHR4A6H8M9 788 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 CCDC154A6NI56 674 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 E9PBE3 544 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 KLF11O14901 512 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 NPIPB7O75200 414 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 SPAG7O75391 227 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 KRT75O95678 551 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 CHRM4P08173 479 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 CECR9P0C854 216 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 NR2F1P10589 423 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 DAOP14920 347 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 CBR1P16152 277 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 LBPP18428 481 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 NPR2P20594 1047 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 S100A3P33764 101 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 ARR3P36575 388 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 ACAA2P42765 397 aaKnown RBP7.5□□□□□ -1.21
VRK1-206ENST00000557222 RPL14P50914 215 aaKnown RBP7.5□□□□□ -1.21
VRK1-206ENST00000557222 SCGB2A2Q13296 93 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 OR7A5Q15622 319 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 SYPL1Q16563 259 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 CARTPTQ16568 116 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 FAM174BQ3ZCQ3 159 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 LIN52Q52LA3 116 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 SPANXN4Q5MJ08 99 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 RNF220Q5VTB9 566 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 SPATA19Q7Z5L4 167 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 GPAT4Q86UL3 456 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 MEX3DQ86XN8 651 aaKnown RBP7.5□□□□□ -1.21
VRK1-206ENST00000557222 RNF130Q86XS8 419 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 EPHX4Q8IUS5 362 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 ANKFN1Q8N957 763 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 MFSD8Q8NHS3 518 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 DNAJA3Q96EY1 480 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 TMEM109Q9BVC6 243 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 ARMC7Q9H6L4 198 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 THUMPD1Q9NXG2 353 aaKnown RBP7.5□□□□□ -1.21
VRK1-206ENST00000557222 TMEFF2Q9UIK5 374 aaPredicted RBP7.5□□□□□ -1.21
VRK1-206ENST00000557222 DSPPQ9NZW4 1301 aa7.5□□□□□ -1.21
VRK1-206ENST00000557222 LOC102725191A0A1B0GVB3 256 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 FRS3O43559 492 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 ZNF432O94892 652 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 LGI1O95970 557 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 CDH2P19022 906 aaPredicted RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 SRP14P37108 136 aaKnown RBP7.49□□□□□ -1.21
VRK1-206ENST00000557222 SELENOPP49908 381 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 CRISP3P54108 245 aa7.49□□□□□ -1.21
VRK1-206ENST00000557222 DVL1P1P54792 670 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms