RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 ZNF582Q96NG8 517 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-246ENST00000557030 DEFB118Q96PH6 123 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 SLC38A2Q96QD8 506 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 C7orf50Q9BRJ6 194 aaKnown RBP4.28□□□□□ -1.72
ATXN3-246ENST00000557030 TMEM43Q9BTV4 400 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 ZSCAN5AQ9BUG6 496 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 KATNB1Q9BVA0 655 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 FNDC11Q9BVV2 318 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF717Q9BY31 904 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-246ENST00000557030 TM6SF2Q9BZW4 377 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 ATG10Q9H0Y0 220 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 MED28Q9H204 178 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 KCNN2Q9H2S1 579 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 SLCO5A1Q9H2Y9 848 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 PPP1R3EQ9H7J1 279 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 PCDHB16Q9NRJ7 776 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 MED17Q9NVC6 651 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 TAS2R10Q9NYW0 307 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 TVP23BQ9NYZ1 205 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 EMC3Q9P0I2 261 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 COPZ2Q9P299 210 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 CLEC2DQ9UHP7 191 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 TBX21Q9UL17 535 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 NDRG2Q9UN36 371 aaKnown RBP4.28□□□□□ -1.72
ATXN3-246ENST00000557030 NCKAP1Q9Y2A7 1128 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 SLC9A8Q9Y2E8 581 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 HSPB11Q9Y547 144 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 STON1Q9Y6Q2 735 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 GBF1Q92538 1859 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 LTBP2Q14767 1821 aa4.28□□□□□ -1.72
ATXN3-246ENST00000557030 OBSL1O75147 1896 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 A0A0B4J293 547 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TRBV4-1A0A0J9YWV2 114 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LOC105371267A0A1B0GV96 52 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 A0A1B0GVI7 797 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 A0A1W2PQM1 296 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LINC01553A4QN01 128 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 WASHC1A8K0Z3 465 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 HEPACAM2A8MVW5 462 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LEUTXA8MZ59 168 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BTN3A3O00478 584 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 PRRG1O14668 218 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BET1O15155 118 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CASC3O15234 703 aaKnown RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TEX28O15482 410 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TLX2O43763 284 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SLC22A5O76082 557 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 POP4O95707 220 aaKnown RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SOD1P00441 154 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CSF2P04141 144 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TPOP07202 933 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ADRA2AP08913 450 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LINC00271P0C7V0 271 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 C1GALT1C1LP0DN25 315 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ANXA3P12429 323 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SRCP12931 536 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 PRKACBP22694 351 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LHCGRP22888 699 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 STOMP27105 288 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 RBMS1P29558 406 aaKnown RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 PPP2R1BP30154 601 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CD70P32970 193 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ETV5P41161 510 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 KHKP50053 298 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ETV1P50549 477 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 MAPK12P53778 367 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 RAG2P55895 527 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 RPS25P62851 125 aaKnown RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SLC7A9P82251 487 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CDK5Q00535 292 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 HSF2Q03933 536 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 GINS1Q14691 196 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TRAM1Q15629 374 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SNAPC1Q16533 368 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SMUG1Q53HV7 270 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SYT14P1Q58G82 188 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF57Q68EA5 555 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CDC73Q6P1J9 531 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SLC27A4Q6P1M0 643 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 C22orf39Q6P5X5 142 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM81Q6P7N7 255 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BRAT1Q6PJG6 821 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TMEM107Q6UX40 140 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BAIAP2L2Q6UXY1 529 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 CEACAM20Q6UY09 585 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ZNF852Q6ZMS4 543 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 SLC51BQ86UW2 128 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LRRC28Q86X40 367 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-246ENST00000557030 IQCF2Q8IXL9 164 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TRAM1L1Q8N609 369 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 NKAIN3Q8N8D7 197 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 ATP6V1C2Q8NEY4 427 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 OR4K1Q8NGD4 311 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 OR6K2Q8NGY2 324 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 OR52P1PQ8NH57 321 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 FIBINQ8TAL6 211 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 BBS10Q8TAM1 723 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 TEX47Q8TBZ9 253 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 LRRC20Q8TCA0 184 aa4.27□□□□□ -1.73
ATXN3-246ENST00000557030 GNPDA2Q8TDQ7 276 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms