RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 C5AR1P21730 350 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 ZP3P21754 424 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 ACTR1BP42025 376 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 ACTR1AP61163 376 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 RAP2BP61225 183 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 SEC61A1P61619 476 aaKnown RBP10.41□□□□□ -0.74
SRP54-213ENST00000556994 DHODHQ02127 395 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 ZMYND11Q15326 602 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 OTPQ5XKR4 325 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 LEG1Q6P5S2 330 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 TMUB2Q71RG4 321 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 TMPRSS12Q86WS5 348 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 LHFPL5Q8TAF8 219 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 OR1E3Q8WZA6 343 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 HAVCR1Q96D42 359 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 OR2M4Q96R27 311 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 OR2A7Q96R45 310 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 MYADMQ96S97 322 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 TRIM2Q9C040 744 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 ARL6Q9H0F7 186 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 MKKSQ9NPJ1 570 aaPredicted RBP10.41□□□□□ -0.74
SRP54-213ENST00000556994 ING1Q9UK53 422 aaPredicted RBP10.41□□□□□ -0.74
SRP54-213ENST00000556994 HEBP2Q9Y5Z4 205 aa10.41□□□□□ -0.74
SRP54-213ENST00000556994 OR2W5A6NFC9 320 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ACOT7O00154 380 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 SIGLEC5O15389 551 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 PPM1BO75688 479 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 TSPAN9O75954 239 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 NKX2-2O95096 273 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ZNF35P13682 527 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 CTRB1P17538 263 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 C4BPBP20851 252 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 S100A11P31949 105 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 RBM34P42696 430 aaKnown RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 CDKN2AP42771 156 aaKnown RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 GUCA2AQ02747 115 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 SIGLEC14Q08ET2 396 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 GAS6Q14393 721 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 PCGF3Q3KNV8 242 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 OLFML2AQ68BL7 652 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 CTRB2Q6GPI1 263 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ULK3Q6PHR2 472 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ARSKQ6UWY0 536 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 LINC00114Q6XXX2 140 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 SLC35F3Q8IY50 421 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 DND1Q8IYX4 353 aaKnown RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 OR10AC1Q8NH08 325 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 PATE1Q8WXA2 126 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ALG12Q9BV10 488 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ULBP3Q9BZM4 244 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 LMAN2LQ9H0V9 348 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 KCNK15Q9H427 330 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 SRA1Q9HD15 236 aaKnown RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 CD93Q9NPY3 652 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 FRRS1LQ9P0K9 344 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 FBXL3Q9UKT7 428 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 CACNA1IQ9P0X4 2223 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 TRAV8-7A0A075B6U6 113 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 H7C1C5 153 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 GOSR2O14653 212 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 OR10H2O60403 315 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 CDC123O75794 336 aaPredicted RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 RASGRP1O95267 797 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 HIST1H2ABP04908 130 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 CTSBP07858 339 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 NAGAP17050 411 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 LSSP48449 732 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 LCN6P62502 163 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ILF3Q12906 894 aaKnown RBP eCLIP10.4□□□□□ -0.748e-7■■■□□ 18.6
SRP54-213ENST00000556994 RUNX3Q13761 415 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 DCAF12L2Q5VW00 463 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 LIPNQ5VXI9 398 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 OR7E24Q6IFN5 339 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 HIST3H2AQ7L7L0 130 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 SFTPA2Q8IWL1 248 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 CAMKVQ8NCB2 501 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 OR51A4Q8NGJ6 313 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 OR5AK2Q8NH90 309 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 HIST1H2ACQ93077 130 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 MIB2Q96AX9 1013 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ANKRD9Q96BM1 317 aaPredicted RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 DNAJA3Q96EY1 480 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ADAD1Q96M93 576 aaKnown RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 TTYH1Q9H313 450 aaPredicted RBP10.4□□□□□ -0.74
SRP54-213ENST00000556994 RXFP3Q9NSD7 469 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 FBXL21Q9UKT6 434 aa10.4□□□□□ -0.74
SRP54-213ENST00000556994 ARID1BQ8NFD5 2236 aaPredicted RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 SLC22A23A1A5C7 686 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 TVP23AA6NH52 213 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 HCRTR1O43613 425 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 SULT1B1O43704 296 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RP2O75695 350 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ADH1BP00325 375 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 AK1P00568 194 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 CD1AP06126 327 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 RAB40ALP0C0E4 278 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 ZNF10P21506 573 aaPredicted RBP10.39□□□□□ -0.75
SRP54-213ENST00000556994 AQP2P41181 271 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 EFNB2P52799 333 aa10.39□□□□□ -0.75
SRP54-213ENST00000556994 LTBQ06643 244 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms