RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 SLC43A1O75387 559 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF432O94892 652 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 HPRP00739 348 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ITGA5P08648 1049 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 UMPSP11172 480 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ITGA2P17301 1181 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 FUT1P19526 365 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 UGT2B15P54855 530 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 NR1H2P55055 460 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 FOXD4Q12950 439 aaPredicted RBP9.41□□□□□ -0.9
LINC00239-201ENST00000556973 TAB1Q15750 504 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 GABRA6Q16445 453 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 BEX5Q5H9J7 111 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 RINLQ6ZS11 566 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 WFDC8Q8IUA0 241 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 CDK20Q8IZL9 346 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 OFCC1Q8IZS5 231 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 C1orf162Q8NEQ5 155 aaPredicted RBP9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ANKK1Q8NFD2 765 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 PFN4Q8NHR9 129 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 LIPHQ8WWY8 451 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 SGTBQ96EQ0 304 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 PIK3IP1Q96FE7 263 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 BOD1Q96IK1 185 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 C7orf34Q96L11 122 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 NSMCE2Q96MF7 247 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ANKRD19PQ9H560 264 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 PLEKHF2Q9H8W4 249 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 TAS2R1Q9NYW7 299 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 RHCGQ9UBD6 479 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ENPP4Q9Y6X5 453 aa9.41□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF726A6NNF4 738 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 ZNF587BE7ETH6 402 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 C11orf98E9PRG8 122 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 BLOC1S5-TXNDC5H3BN57 136 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 ARPC2O15144 300 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 SIAH2O43255 324 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 RNF13O43567 381 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 TRAF3IP2O43734 574 aaPredicted RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 UPK3AO75631 287 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 RAD51DO75771 328 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 OR7A10O76100 309 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 PRSS23O95084 383 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 HLA-DOBP13765 273 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 RHCEP18577 417 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 POU3F1Q03052 451 aaPredicted RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 PRKCDQ05655 676 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 PPA1Q15181 289 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 STK11Q15831 433 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 RRM2BQ7LG56 351 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 SLC46A3Q7Z3Q1 461 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 TSEN54Q7Z6J9 526 aaKnown RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 C17orf78Q8N4C9 275 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 PIK3C3Q8NEB9 887 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 ACOT11Q8WXI4 607 aaPredicted RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 BPIFA2Q96DR5 249 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 TXNDC15Q96J42 360 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 LRR1Q96L50 414 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 ADAD1Q96M93 576 aaKnown RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 OR2M2Q96R28 347 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 MUC13Q9H3R2 512 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 NMNAT1Q9HAN9 279 aaPredicted RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 MAN2C1Q9NTJ4 1040 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 C20orf141Q9NUB4 165 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 NDUFAF4Q9P032 175 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 ACTR3BQ9P1U1 418 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 PRPF19Q9UMS4 504 aaKnown RBP9.4□□□□□ -0.9
LINC00239-201ENST00000556973 UNC79Q9P2D8 2635 aa9.4□□□□□ -0.9
LINC00239-201ENST00000556973 A0A087WUU8 490 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.39□□□□□ -0.91
LINC00239-201ENST00000556973 A0A1W2PRQ8 180 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 SLC35F4A4IF30 521 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 RPL36A-HNRNPH2H7BZ11 118 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 H1F0P07305 194 aaKnown RBP9.39□□□□□ -0.91
LINC00239-201ENST00000556973 TSPAN19P0C672 248 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 IFI30P13284 250 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 PAX7P23759 505 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 LOXP28300 417 aaPredicted RBP9.39□□□□□ -0.91
LINC00239-201ENST00000556973 FOXG1P55316 489 aaPredicted RBP9.39□□□□□ -0.91
LINC00239-201ENST00000556973 SMIM11AP58511 58 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 ROR2Q01974 943 aaKnown RBP9.39□□□□□ -0.91
LINC00239-201ENST00000556973 LGALS3BPQ08380 585 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 DGCR6Q14129 220 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 ANKDD1AQ495B1 522 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 MTX3Q5HYI7 312 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 NCMAPQ5T1S8 102 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 C9orf135Q5VTT2 229 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 ALKBH2Q6NS38 261 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 MBOAT2Q6ZWT7 520 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 SLC35D2Q76EJ3 337 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 NANOGNBQ7Z5D8 188 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 CDH24Q86UP0 819 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 C20orf196Q8IYI0 205 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 TMEM123Q8N131 208 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 GPR137CQ8N3F9 429 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 FAM86B1Q8N7N1 296 aa9.39□□□□□ -0.91
LINC00239-201ENST00000556973 NINJ1Q92982 152 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms