RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PLPPR2Q96GM1 343 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 HS6ST2Q96MM7 605 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 MUS81Q96NY9 551 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 NANSQ9NR45 359 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 CD300AQ9UGN4 299 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 ZNF229Q9UJW7 825 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 NOX1Q9Y5S8 564 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 CADP27708 2225 aa20.11■□□□□ 0.81
TDP1-216ENST00000556867 RAI1Q7Z5J4 1906 aaPredicted RBP20.1■□□□□ 0.81
TDP1-216ENST00000556867 ENO4A6NNW6 628 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 MT-ND1P03886 318 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 IFNA8P32881 189 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 UGT2B15P54855 530 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 MXRA7P84157 204 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 TGFBR3Q03167 851 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 ST3GAL3Q11203 375 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 ALKBH2Q6NS38 261 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 NHLRC1Q6VVB1 395 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 FKBP9P1Q75LS8 142 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 SLC46A3Q7Z3Q1 461 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 OFCC1Q8IZS5 231 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 C17orf78Q8N4C9 275 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 TMEM239Q8WW34 195 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 ALKBH3Q96Q83 286 aaPredicted RBP20.1■□□□□ 0.81
TDP1-216ENST00000556867 CDRT15Q96T59 188 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 TMEM204Q9BSN7 226 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 PLEKHA6Q9Y2H5 1048 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 SNX13Q9Y5W8 968 aa20.1■□□□□ 0.81
TDP1-216ENST00000556867 ZNF587BE7ETH6 402 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 GMNNO75496 209 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 KRT33AO76009 404 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 ASAH2BP0C7U1 165 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 HLA-DOBP13765 273 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 POU3F1Q03052 451 aaPredicted RBP20.09■□□□□ 0.81
TDP1-216ENST00000556867 LGALS3BPQ08380 585 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 SPATS1Q496A3 300 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 C9orf135Q5VTT2 229 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 PXKQ7Z7A4 578 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 DEFB107AQ8IZN7 70 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 TMEM123Q8N131 208 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 FAM156AQ8NDB6 213 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 PFN4Q8NHR9 129 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 BOD1Q96IK1 185 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 NSL1Q96IY1 281 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 OR2M2Q96R28 347 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 GORASP2Q9H8Y8 452 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 DCAF13Q9NV06 445 aaKnown RBP20.09■□□□□ 0.81
TDP1-216ENST00000556867 MAGEL2Q9UJ55 1249 aa20.09■□□□□ 0.81
TDP1-216ENST00000556867 FFAR1O14842 300 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 SLC43A1O75387 559 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 UPK3AO75631 287 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 RAF1P04049 648 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 ADORA3P0DMS8 318 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 TCN1P20061 433 aaPredicted RBP20.08■□□□□ 0.81
TDP1-216ENST00000556867 DNASE1P24855 282 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 IST1P53990 364 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 ZP4Q12836 540 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 NCMAPQ5T1S8 102 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 C1QTNF12Q5T7M4 302 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 ZNF704Q6ZNC4 412 aaPredicted RBP20.08■□□□□ 0.81
TDP1-216ENST00000556867 LINGO2Q7L985 606 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 LRRC17Q8N6Y2 441 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 RBM15BQ8NDT2 890 aaKnown RBP20.08■□□□□ 0.81
TDP1-216ENST00000556867 ESRP2Q9H6T0 727 aaKnown RBP20.08■□□□□ 0.81
TDP1-216ENST00000556867 MAN2C1Q9NTJ4 1040 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 SAMD4AQ9UPU9 718 aaKnown RBP20.08■□□□□ 0.81
TDP1-216ENST00000556867 MED31Q9Y3C7 131 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 SLC25A15Q9Y619 301 aa20.08■□□□□ 0.81
TDP1-216ENST00000556867 J3KTA2 159 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 OR7A10O76100 309 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 PRSS23O95084 383 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 OR6A2O95222 327 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 ATE1O95260 518 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 AHCYP23526 432 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 YAP1P46937 504 aaKnown RBP20.07■□□□□ 0.8
TDP1-216ENST00000556867 NANOGNBQ7Z5D8 188 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 PIK3C3Q8NEB9 887 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 ANKK1Q8NFD2 765 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 OR52N5Q8NH56 324 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 LIPHQ8WWY8 451 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 SGTBQ96EQ0 304 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 FNDC11Q9BVV2 318 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 SLC17A5Q9NRA2 495 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 C20orf141Q9NUB4 165 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 MED29Q9NX70 200 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 TAS2R5Q9NYW4 299 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 NPAP1Q9NZP6 1156 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 ITGB1BP2Q9UKP3 347 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 ENPP4Q9Y6X5 453 aa20.07■□□□□ 0.8
TDP1-216ENST00000556867 HTR3EA5X5Y0 456 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 B2RBV5 119 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 RPL36A-HNRNPH2H7BZ11 118 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 HIST1H2ABP04908 130 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 UMPSP11172 480 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 CALB2P22676 271 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 SH3BGRP55822 239 aaPredicted RBP20.06■□□□□ 0.8
TDP1-216ENST00000556867 ROR2Q01974 943 aaKnown RBP20.06■□□□□ 0.8
TDP1-216ENST00000556867 TRAM2Q15035 370 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 HIST3H2AQ7L7L0 130 aa20.06■□□□□ 0.8
TDP1-216ENST00000556867 TSEN54Q7Z6J9 526 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms