RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SMR3AQ99954 134 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 METTL7AQ9H8H3 244 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CMC2Q9NRP2 79 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 KLRF1Q9NZS2 232 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 WIF1Q9Y5W5 379 aa12.85□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TRAV36DV7A0A075B6V5 113 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RIIAD1A6NNX1 92 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 KPNA4O00629 521 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IMPA2O14732 288 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ARPC3O15145 178 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ITGA10O75578 1167 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OR2J2O76002 312 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RAB36O95755 333 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IGFBP1P08833 259 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PEPDP12955 493 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HK1P19367 917 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 FUT1P19526 365 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 TACR3P29371 465 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RNF144AP50876 292 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SSR4P51571 173 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 RPS4XP62701 263 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF91Q05481 1191 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IRF3Q14653 427 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 QPRTQ15274 297 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CNPY1Q3B7I2 92 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF791Q3KP31 576 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CLVS1Q8IUQ0 354 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ANKK1Q8NFD2 765 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 OR13C2Q8NGS9 318 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ASB15Q8WXK1 588 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SH3YL1Q96HL8 342 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 THOC3Q96J01 351 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SGCZQ96LD1 299 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ZNF582Q96NG8 517 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 MYCBPQ99417 103 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 IFT27Q9BW83 186 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 NANSQ9NR45 359 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 PPP4R1LQ9P1A2 415 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 WARS2Q9UGM6 360 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 DIMT1Q9UNQ2 313 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 ERGIC3Q9Y282 383 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 HIF3AQ9Y2N7 669 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 MEMO1Q9Y316 297 aa12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 EXOSC1Q9Y3B2 195 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 SPIN1Q9Y657 262 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-206ENST00000556765 A0A087WZY1 265 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 TRAV17A0A0B4J275 112 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 SLC22A31A6NKX4 558 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 A8MVM7 634 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 ZNF208O43345 1280 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 OIP5O43482 229 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 FADS2O95864 444 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 SERPINA7P05543 415 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 ACVR2AP27037 513 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 HTR1FP30939 366 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 CAPZA2P47755 286 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 MTNR1AP48039 350 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 TNFSF10P50591 281 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 ZNF41P51814 821 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 NUDT6P53370 316 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 GAS1P54826 345 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 CDH11P55287 796 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 FBXW4P57775 412 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 MLF1P58340 268 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 POU4F2Q12837 409 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 C1DQ13901 141 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 ZNF74Q16587 644 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 SLC25A53Q5H9E4 307 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 EMC4Q5J8M3 183 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 CLEC12AQ5QGZ9 265 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 NCCRP1Q6ZVX7 275 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 SLC46A3Q7Z3Q1 461 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 RPS19BP1Q86WX3 136 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 ANKRD13BQ86YJ7 626 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 OR4Q3Q8NH05 313 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 DUSP19Q8WTR2 217 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 THAP3Q8WTV1 239 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 ISOC1Q96CN7 298 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 MRGPRX4Q96LA9 322 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 FRMD6Q96NE9 622 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 TSC22D3Q99576 134 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 MND1Q9BWT6 205 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 JAM3Q9BX67 310 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 PTGES2Q9H7Z7 377 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 FGF20Q9NP95 211 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 DNAJC27Q9NZQ0 273 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 OSGIN1Q9UJX0 560 aa12.83□□□□□ -0.36
TRAPPC6B-206ENST00000556765 MPDZO75970 2070 aa12.82□□□□□ -0.36
TRAPPC6B-206ENST00000556765 INTS1Q8N201 2190 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-206ENST00000556765 IGKV1D-42A0A075B6H8 117 aa12.82□□□□□ -0.36
TRAPPC6B-206ENST00000556765 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms