RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TRDCB7Z8K6 153 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 F5H6K3 240 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 CACNG3O60359 315 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 OR10H3O60404 316 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 MOSP00540 346 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 CST1P01037 141 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 LGALS2P05162 132 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 PCCAP05165 728 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 ASGR1P07306 291 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 CHTF8P0CG12 524 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 HSMCR30P0CW71 290 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 ATP1B2P14415 290 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 ATP6V1B2P21281 511 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 MAP3K8P41279 467 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 SH3BGRP55822 239 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 TAS2R19P59542 299 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 KLRC3Q07444 240 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 PLD1Q13393 1074 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 SSX2Q16385 188 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 DMRTC1Q5HYR2 192 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 RALGPS2Q86X27 583 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 SLC35F2Q8IXU6 374 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 ATP6V0D2Q8N8Y2 350 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 TRPV1Q8NER1 839 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 MAGEE2Q8TD90 523 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 UBE2E3Q969T4 207 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 EFHD2Q96C19 240 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 HIST1H4GQ99525 98 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 NUP58Q9BVL2 599 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 SELENOIQ9C0D9 397 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 GLRX2Q9NS18 164 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 DDX18Q9NVP1 670 aaKnown RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 SLC7A8Q9UHI5 535 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 V9GY05 133 aa2.75□□□□□ -1.97
SCFD1-221ENST00000556534 ZNFX1Q9P2E3 1918 aaKnown RBP2.75□□□□□ -1.97
SCFD1-221ENST00000556534 WDR19Q8NEZ3 1342 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 SH3TC1Q8TE82 1336 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CLSPNQ9HAW4 1339 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 IGHV3-64DA0A0J9YX35 117 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 A0A1B0GUS0 222 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 SERTM2A0A1B0GWG4 89 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 NKX2-6A6NCS4 301 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 A6NIZ1 184 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 ANKRD63C9JTQ0 380 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 HAS3O00219 553 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 DCTN6O00399 190 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CTAG2O75638 210 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 ATP5LO75964 103 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CLDN9O95484 217 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 AP2A1O95782 977 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CRYGBP07316 175 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 FGF4P08620 206 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 GZMAP12544 262 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 GALP22466 123 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 GNA11P29992 359 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 SHMT2P34897 504 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 RAP1BP61224 184 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CDK16Q00536 496 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 OGDHQ02218 1023 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 TGFBR3Q03167 851 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 TGM3Q08188 693 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 GRB7Q14451 532 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 RCN1Q15293 331 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 C1orf185Q5T7R7 199 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 LRRC66Q68CR7 880 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CTRB2Q6GPI1 263 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 H2BFWTQ7Z2G1 175 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CCDC50Q8IVM0 306 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 FAM83FQ8NEG4 500 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-221ENST00000556534 OR51G1Q8NGK1 321 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 OR1L6Q8NGR2 347 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 KCNG3Q8TAE7 436 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 AGR3Q8TD06 166 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 TM4SF19Q96DZ7 209 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 FMO2Q99518 471 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 C20orf85Q9H1P6 137 aa2.74□□□□□ -1.97
SCFD1-221ENST00000556534 PATZ1Q9HBE1 687 aaKnown RBP2.74□□□□□ -1.97
SCFD1-221ENST00000556534 ZNF223Q9UK11 482 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CAB39Q9Y376 341 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-221ENST00000556534 CSDC2Q9Y534 153 aaKnown RBP2.74□□□□□ -1.97
SCFD1-221ENST00000556534 TTC41PQ6P2S7 1318 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 PPIAL4EA0A075B759 164 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 A0A0G2JLM5 398 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 HEATR9A2RTY3 570 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 MAGEB4O15481 346 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 RGS16O15492 202 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 POLR2DO15514 142 aaKnown RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 PFKFB2O60825 505 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 STAMBPO95630 424 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 CT62P0C5K7 136 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 PPIAL4FP0DN26 164 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 CCDC130P13994 396 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 CRISP2P16562 243 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 NPR2P20594 1047 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 CXCR2P25025 360 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 HNRNPH3P31942 346 aaKnown RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 CSNK1DP48730 415 aa2.73□□□□□ -1.97
SCFD1-221ENST00000556534 KPNA2P52292 529 aaKnown RBP2.73□□□□□ -1.97
SCFD1-221ENST00000556534 CRYBB1P53674 252 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms