RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF750Q32MQ0 723 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 PROX2Q3B8N5 592 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ALKBH6Q3KRA9 238 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 PHYHD1Q5SRE7 291 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 REEP3Q6NUK4 255 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ABHD17CQ6PCB6 329 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RBMS3Q6XE24 437 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 C6orf120Q7Z4R8 191 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 VN1R4Q7Z5H5 301 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RBM45Q8IUH3 476 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SHISA5Q8N114 240 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 FAM98AQ8NCA5 519 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KBTBD8Q8NFY9 601 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OR10G2Q8NGC3 310 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OR5D16Q8NGK9 328 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GEMIN6Q8WXD5 167 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SLAMF9Q96A28 289 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 FUNDC2Q9BWH2 189 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RAB11FIP5Q9BXF6 653 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GPR87Q9BY21 358 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 DGCR6LQ9BY27 220 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 TOLLIPQ9H0E2 274 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RGCCQ9H4X1 137 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GPN2Q9H9Y4 310 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ACSS1Q9NUB1 689 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM9Q9P0T7 183 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 APOBEC3BQ9UH17 382 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF230Q9UIE0 474 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CES1P1Q9UKY3 287 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 TP53BP1Q12888 1972 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KHNYNO15037 678 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF208O43345 1280 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ERI3O43414 337 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 NME2P1O60361 137 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 F10P00742 488 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 IFNA7P01567 189 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 HOXC4P09017 264 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 INHBBP09529 407 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 HIST1H1TP22492 207 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 S100A2P29034 98 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CEACAM3P40198 252 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OPRL1P41146 370 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SSR2P43308 183 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 KCNJ3P48549 501 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SNRPEP62304 92 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SPIBQ01892 262 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MVKQ03426 396 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SNTB2Q13425 540 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 IL18Q14116 193 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CLINT1Q14677 625 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GPR19Q15760 415 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 SNAPC1Q16533 368 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 PNLIPRP3Q17RR3 467 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 QSOX2Q6ZRP7 698 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MTSS1LQ765P7 747 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OLIG3Q7RTU3 272 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ADGRG3Q86Y34 549 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 GID4Q8IVV7 300 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF283Q8N7M2 679 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ACOT4Q8N9L9 421 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OR4Q3Q8NH05 313 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 NPRL2Q8WTW4 380 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 DNASE1L2Q92874 299 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 CDS1Q92903 461 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ZBED6CLQ96FA7 236 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 OR2M4Q96R27 311 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 UTP23Q9BRU9 249 aaKnown RBP4.69□□□□□ -1.66
TMEM260-210ENST00000556422 MRI1Q9BV20 369 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 P4HTMQ9NXG6 502 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RHCGQ9UBD6 479 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 IL17BQ9UHF5 180 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 RNF6Q9Y252 685 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ANGPT4Q9Y264 503 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 ENPP4Q9Y6X5 453 aa4.69□□□□□ -1.66
TMEM260-210ENST00000556422 PCDH15Q96QU1 1955 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TMEM131Q92545 1883 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 DSPPQ9NZW4 1301 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 LINC00862A6NCI5 91 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ISM1B1AKI9 464 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 KRT33AO76009 404 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 AIFM1O95831 613 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 VIPP01282 170 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SERPIND1P05546 499 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 RPA2P15927 270 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 GLRA1P23415 457 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 ATP5A1P25705 553 aaKnown RBP4.68□□□□□ -1.66
TMEM260-210ENST00000556422 CERS1P27544 350 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 DDTP30046 118 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 NUDT6P53370 316 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 NFATC4Q14934 902 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SYPL1Q16563 259 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 AMZ1Q400G9 498 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SPANXN2Q5MJ10 180 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 DESI1Q6ICB0 168 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TCTN3Q6NUS6 607 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 VRK2Q86Y07 508 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SFTPA2Q8IWL1 248 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 TDHQ8IZJ6 230 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 LGI4Q8N135 537 aa4.68□□□□□ -1.66
TMEM260-210ENST00000556422 SLC22A18ASQ8N1D0 253 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms