RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 EXD3Q8N9H8 876 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 FADS6Q8N9I5 356 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 OR6Q1Q8NGQ2 317 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 OR2T27Q8NH04 317 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 MFSD8Q8NHS3 518 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 SLC25A36Q96CQ1 311 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 ZMYND19Q96E35 227 aaPredicted RBP13.29□□□□□ -0.28
VPS33B-205ENST00000556096 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 COQ7Q99807 217 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 GPR87Q9BY21 358 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 EXOSC4Q9NPD3 245 aaKnown RBP13.29□□□□□ -0.28
VPS33B-205ENST00000556096 INIPQ9NRY2 104 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 FOXJ2Q9P0K8 574 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF346Q9UL40 294 aaKnown RBP13.29□□□□□ -0.28
VPS33B-205ENST00000556096 HRH3Q9Y5N1 445 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 CORINQ9Y5Q5 1042 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 KNTC1P50748 2209 aa13.29□□□□□ -0.28
VPS33B-205ENST00000556096 C21orf140B9A014 251 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF670-ZNF695F2Z2N8 137 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 PLPP3O14495 311 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 MRPL3P09001 348 aaKnown RBP13.28□□□□□ -0.28
VPS33B-205ENST00000556096 GRPRP30550 384 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 OTX2P32243 289 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 IDUAP35475 653 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF85Q03923 595 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ZP4Q12836 540 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 FOXF1Q12946 379 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 KRR1Q13601 381 aaKnown RBP13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF404Q494X3 552 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 H3F3CQ6NXT2 135 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 GPALPP1Q8IXQ4 340 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 MCFD2Q8NI22 146 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ZPLD1Q8TCW7 415 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 PAQR8Q8TEZ7 354 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 S100ZQ8WXG8 99 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 BORCS5Q969J3 196 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 SNX18Q96RF0 628 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 CNN2Q99439 309 aaKnown RBP13.28□□□□□ -0.28
VPS33B-205ENST00000556096 TBX5Q99593 518 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 NPAS1Q99742 590 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ANGPTL4Q9BY76 406 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 OR11A1Q9GZK7 315 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 ISG20L2Q9H9L3 353 aaKnown RBP13.28□□□□□ -0.28
VPS33B-205ENST00000556096 SH2D2AQ9NP31 389 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 WASF3Q9UPY6 502 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 VDAC3Q9Y277 283 aa13.28□□□□□ -0.28
VPS33B-205ENST00000556096 FZD7O75084 574 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 TNFSF15O95150 251 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 IGHMP01871 453 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 MT-ND5P03915 603 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 ADRB1P08588 477 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 FGF9P31371 208 aaPredicted RBP13.27□□□□□ -0.28
VPS33B-205ENST00000556096 OPRL1P41146 370 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 DBPQ10586 325 aaPredicted RBP13.27□□□□□ -0.28
VPS33B-205ENST00000556096 DNASE1L3Q13609 305 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 MESTQ5EB52 335 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 LINC01590Q5TEZ4 76 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 ZBTB46Q86UZ6 589 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 KLBQ86Z14 1044 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 ARIH2OSQ8N7S6 290 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 SCAIQ8N9R8 606 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 WDSUB1Q8N9V3 476 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 ATP6V1C2Q8NEY4 427 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 POC1BQ8TC44 478 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 ZNRF4Q8WWF5 429 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.28
VPS33B-205ENST00000556096 CDADC1Q9BWV3 514 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 PTGES2Q9H7Z7 377 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 SERINC1Q9NRX5 453 aa13.27□□□□□ -0.28
VPS33B-205ENST00000556096 TXNL4BQ9NX01 149 aaKnown RBP13.27□□□□□ -0.28
VPS33B-205ENST00000556096 TRDV1A0A1B0GX56 115 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 A0A1W2PQL4 384 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-205ENST00000556096 FAM47E-STBD1D6RA91 191 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 TERTO14746 1132 aaKnown RBP13.27□□□□□ -0.29
VPS33B-205ENST00000556096 RNF13O43567 381 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 OR6A2O95222 327 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 RENP00797 406 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 TFP02787 698 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 GAAP10253 952 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 CD53P19397 219 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 GALP22466 123 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 FKBP2P26885 142 aaKnown RBP13.27□□□□□ -0.29
VPS33B-205ENST00000556096 ADH6P28332 368 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 SOX6P35712 828 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 TAS2R43P59537 309 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 RPL27P61353 136 aaKnown RBP13.27□□□□□ -0.29
VPS33B-205ENST00000556096 RPS25P62851 125 aaKnown RBP13.27□□□□□ -0.29
VPS33B-205ENST00000556096 GABREP78334 506 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 NLGN4YQ8NFZ3 816 aaPredicted RBP13.27□□□□□ -0.29
VPS33B-205ENST00000556096 OR4K17Q8NGC6 315 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 OR51L1Q8NGJ5 315 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 C1GALT1C1Q96EU7 318 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 ALG12Q9BV10 488 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 TXNIPQ9H3M7 391 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 HMG20AQ9NP66 347 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 AKIP1Q9NQ31 210 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 TRIM36Q9NQ86 728 aa13.27□□□□□ -0.29
VPS33B-205ENST00000556096 RPRD1BQ9NQG5 326 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms