RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 Q6ZPB1 254 aaPredicted RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PXKQ7Z7A4 578 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 GPAT4Q86UL3 456 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 UEVLDQ8IX04 471 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 C8orf59Q8N0T1 100 aaPredicted RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 LNX2Q8N448 690 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 FAM81AQ8TBF8 368 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 SNRNP40Q96DI7 357 aaKnown RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PLEKHA8Q96JA3 519 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 OXGR1Q96P68 337 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 ERMAPQ96PL5 475 aaPredicted RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 UCN2Q96RP3 112 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 GPX7Q96SL4 187 aaPredicted RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PITX2Q99697 317 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 KATNB1Q9BVA0 655 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 POLDIP3Q9BY77 421 aaKnown RBP9.87□□□□□ -0.83
TMEM260-208ENST00000555905 ANKRD60Q9BZ19 345 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PRRG4Q9BZD6 226 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 PRDM14Q9GZV8 571 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 ENKD1Q9H0I2 346 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 GRHPRQ9UBQ7 328 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 LRRC42Q9Y546 428 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 NOX1Q9Y5S8 564 aa9.87□□□□□ -0.83
TMEM260-208ENST00000555905 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 IGHV3-15A0A0B4J1V0 119 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 LOC102725191A0A1B0GVB3 256 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 RIIAD1A6NNX1 92 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 E9PQ18 207 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 IMPA2O14732 288 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 SMAD9O15198 467 aaKnown RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 DENRO43583 198 aaKnown RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 SERPINI2O75830 405 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 WISP2O76076 250 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 IFNGP01579 166 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 GNAO1P09471 354 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 APEHP13798 732 aaKnown RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF43P17038 809 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 PTGS2P35354 604 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ERVK-25P63136 954 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 POU3F1Q03052 451 aaPredicted RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 TOP3AQ13472 1001 aaPredicted RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 PON3Q15166 354 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 SNAPC1Q16533 368 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF691Q5VV52 312 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 C12orf73Q69YU5 71 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 GPR139Q6DWJ6 353 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ACSM5Q6NUN0 579 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 FCRLAQ7L513 359 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 CCDC103Q8IW40 242 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 KDM8Q8N371 416 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 LRRC75AQ8NAA5 344 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 OR4Q3Q8NH05 313 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ZPLD1Q8TCW7 415 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ROBO4Q8WZ75 1007 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF845Q96IR2 970 aaPredicted RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 CNBD2Q96M20 576 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 MUS81Q96NY9 551 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 SLX1AQ9BQ83 275 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 TUBA1CQ9BQE3 449 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 SF3B5Q9BWJ5 86 aaKnown RBP9.86□□□□□ -0.83
TMEM260-208ENST00000555905 FANCFQ9NPI8 374 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 NRIP3Q9NQ35 241 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ASF1BQ9NVP2 202 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 TVP23BQ9NYZ1 205 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF175Q9Y473 711 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 IER3IP1Q9Y5U9 82 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 HSPE1-MOB4S4R3N1 261 aa9.86□□□□□ -0.83
TMEM260-208ENST00000555905 A6NIZ1 184 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 NPIPB13A6NJU9 1138 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 SLC22A20A6NK97 555 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 CLCA1A8K7I4 914 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 AHRRA9YTQ3 701 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 ZNF814B7Z6K7 855 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 NPIPB4C9JG80 1138 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 XKRYO14609 159 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 ARPC3O15145 178 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 MPZL2O60487 215 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 CYTIPO60759 359 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 CLIC3O95833 236 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 BCL10O95999 233 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 PLGP00747 810 aaPredicted RBP9.85□□□□□ -0.83
TMEM260-208ENST00000555905 IGHMP01871 453 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 FCGR2AP12318 317 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 ABOP16442 354 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 MYF6P23409 242 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 SDHAP31040 664 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 PCYT1AP49585 367 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 P2RY4P51582 365 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 TDGF1P3P51864 188 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 RAP1BP61224 184 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 RPL27P61353 136 aaKnown RBP9.85□□□□□ -0.83
TMEM260-208ENST00000555905 RAP1AP62834 184 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 IL5RAQ01344 420 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 MED21Q13503 144 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 POU4F3Q15319 338 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 ACKR1Q16570 336 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 PRR30Q53SZ7 412 aaPredicted RBP9.85□□□□□ -0.83
TMEM260-208ENST00000555905 EMC4Q5J8M3 183 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 SLC35F1Q5T1Q4 408 aa9.85□□□□□ -0.83
TMEM260-208ENST00000555905 FAM205BPQ63HN1 556 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms