RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 STRADBQ9C0K7 418 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 EGLN3Q9H6Z9 239 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 WDR54Q9H977 334 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 AMBNQ9NP70 447 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 ACOT13Q9NPJ3 140 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 EXOSC3Q9NQT5 275 aaKnown RBP6.2□□□□□ -1.42
SLIRP-204ENST00000555890 MED17Q9NVC6 651 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 GPR83Q9NYM4 423 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 FLRT3Q9NZU0 649 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 LUZP4Q9P127 313 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF223Q9UK11 482 aaPredicted RBP6.2□□□□□ -1.42
SLIRP-204ENST00000555890 BAIAP2Q9UQB8 552 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 HYDINQ4G0P3 5121 aa6.2□□□□□ -1.42
SLIRP-204ENST00000555890 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 A0A1W2PQD3 144 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SAGE2PA6NJ88 616 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 C9J4A7 227 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 M0R129 80 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PIP5K1CO60331 668 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 TSPAN2O60636 221 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 BCAS1O75363 584 aaPredicted RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 INMTO95050 263 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 NGFRP08138 427 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 STSP08842 583 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SAGP10523 405 aaPredicted RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PNMTP11086 282 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 NAGAP17050 411 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CCNA2P20248 432 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PSMB9P28065 219 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CCKBRP32239 447 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 GRK5P34947 590 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SLC16A1P53985 500 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 GP2P55259 537 aaKnown RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 TBCEQ15813 527 aaPredicted RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PGGHGQ32M88 737 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 UBE2UQ5VVX9 321 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PLAG1Q6DJT9 500 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 ACSM5Q6NUN0 579 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF620Q6ZNG0 422 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 LANCL3Q6ZV70 420 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CPEB2Q7Z5Q1 589 aaKnown RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 MEX3DQ86XN8 651 aaKnown RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 C9orf40Q8IXQ3 194 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PRR22Q8IZ63 422 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 IQCF1Q8N6M8 205 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 TMCO5AQ8N6Q1 288 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 POGLUT1Q8NBL1 392 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 NFAM1Q8NET5 270 aaPredicted RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 OR8K3Q8NH51 312 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 ZNF563Q8TA94 476 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 NUBPLQ8TB37 319 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 TMEM163Q8TC26 289 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 MR1Q95460 341 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 C12orf43Q96C57 262 aaKnown RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 OMA1Q96E52 524 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SGTBQ96EQ0 304 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SAMD8Q96LT4 415 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SIGLEC11Q96RL6 698 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 DOK1Q99704 481 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CMKLR1Q99788 373 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CTRCQ99895 268 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CDCA4Q9BXL8 241 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 TBL1XR1Q9BZK7 514 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SLC19A3Q9BZV2 496 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 LAT2Q9GZY6 243 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 DSN1Q9H410 356 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 APMAPQ9HDC9 416 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 CHCHD3Q9NX63 227 aaKnown RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 SLC39A1Q9NY26 324 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 DNAJC27Q9NZQ0 273 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 TNFRSF10DQ9UBN6 386 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 ICAM5Q9UMF0 924 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 EDARQ9UNE0 448 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 PPIEQ9UNP9 301 aaKnown RBP6.19□□□□□ -1.42
SLIRP-204ENST00000555890 HEATR5AQ86XA9 2040 aa6.19□□□□□ -1.42
SLIRP-204ENST00000555890 A0A087WUJ7 227 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 IGHV3-20A0A0C4DH32 117 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 OR6C70A6NIJ9 312 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 KDM4EB2RXH2 506 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 H3BMQ9 156 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 KPNA4O00629 521 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SURF4O15260 269 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PRKYO43930 277 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PRKNO60260 465 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ICOSLGO75144 302 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 ZFAND5O76080 213 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 IGHEP01854 428 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 DBTP11182 482 aaKnown RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PGCP20142 388 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 MAKP20794 623 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 C21orf33P30042 268 aaPredicted RBP6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SSTR2P30874 369 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SLC6A6P31641 620 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 PEX19P40855 299 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SLC15A1P46059 708 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 SLC9A3P48764 834 aa6.18□□□□□ -1.42
SLIRP-204ENST00000555890 CCR4P51679 360 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms