RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PXKQ7Z7A4 578 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 CALHM3Q86XJ0 350 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 TMEM123Q8N131 208 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 CIARTQ8N365 385 aaPredicted RBP10.35□□□□□ -0.75
VRK1-204ENST00000555351 GPR32P1Q8NGA4 272 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 ADAD1Q96M93 576 aaKnown RBP10.35□□□□□ -0.75
VRK1-204ENST00000555351 OR2M2Q96R28 347 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 MCHR1Q99705 422 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 KATNB1Q9BVA0 655 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 MED4Q9NPJ6 270 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 FBXO9Q9UK97 447 aaPredicted RBP10.35□□□□□ -0.75
VRK1-204ENST00000555351 POU2F3Q9UKI9 436 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 AP3M1Q9Y2T2 418 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 VPS13CQ709C8 3753 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 NSD1Q96L73 2696 aaPredicted RBP10.34□□□□□ -0.75
VRK1-204ENST00000555351 TRAPPC13A5PLN9 417 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 TRIM64A6NGJ6 449 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 TRIM64BA6NI03 449 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 MS4A18H0YCH9 400 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 PDE5AO76074 875 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 LY6G6DO95868 133 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 IGF2P01344 180 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 IGLV1-44P01699 117 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 NQO1P15559 274 aaKnown RBP10.34□□□□□ -0.75
VRK1-204ENST00000555351 CD247P20963 164 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 APOBEC3AP31941 199 aaPredicted RBP10.34□□□□□ -0.75
VRK1-204ENST00000555351 DSCR9P59020 149 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 UBE2NP61088 152 aaKnown RBP10.34□□□□□ -0.75
VRK1-204ENST00000555351 ROR2Q01974 943 aaKnown RBP10.34□□□□□ -0.75
VRK1-204ENST00000555351 CHRNB3Q05901 458 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 PUDPQ08623 228 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 KLF10Q13118 480 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 CLEC12BQ2HXU8 276 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 MS4A18Q3C1V0 323 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 MMEL1Q495T6 779 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 HSP90B2PQ58FF3 399 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 NHLRC1Q6VVB1 395 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 ZNF627Q7L945 461 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 SNX32Q86XE0 403 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 UEVLDQ8IX04 471 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 KDM8Q8N371 416 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 MUC15Q8N387 334 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 GPR137CQ8N3F9 429 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 SMYD1Q8NB12 490 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 PCYOX1LQ8NBM8 494 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 OR6T1Q8NGN1 323 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 OR10A6Q8NH74 314 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 SLC26A7Q8TE54 656 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 ADAMTS16Q8TE57 1224 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 LRRC58Q96CX6 371 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 HS6ST2Q96MM7 605 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 ALKBH3Q96Q83 286 aaPredicted RBP10.34□□□□□ -0.75
VRK1-204ENST00000555351 SLC38A2Q96QD8 506 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 SMR3AQ99954 134 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 ECSITQ9BQ95 431 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 ZNF426Q9BUY5 554 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 SAR1AQ9NR31 198 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 FGFR1OP2Q9NVK5 253 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 ZNF446Q9NWS9 450 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 GID8Q9NWU2 228 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 BAG5Q9UL15 447 aa10.34□□□□□ -0.75
VRK1-204ENST00000555351 A0A1W2PR80 420 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 ZNF99A8MXY4 864 aaPredicted RBP10.33□□□□□ -0.76
VRK1-204ENST00000555351 M0R3H8 397 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 FXYD1O00168 92 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 MRASO14807 208 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 UPK3AO75631 287 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 IFNA14P01570 189 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 IGKV3-15P01624 115 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 IGHV4-39P01824 125 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 CRYAAP02489 173 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 CDKN1AP38936 164 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 FABP6P51161 128 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 ZP4Q12836 540 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 PMS2P3Q13401 168 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 TNK1Q13470 666 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 NPTX1Q15818 432 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 HIKESHIQ53FT3 197 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 ENTPD8Q5MY95 495 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 CGB2Q6NT52 195 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 LINGO2Q7L985 606 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 IL17RDQ8NFM7 739 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 OR5J2Q8NH18 312 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 TAMM41Q96BW9 452 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 WFDC6Q9BQY6 131 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 NELFAQ9H3P2 528 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 DENND2DQ9H6A0 471 aaPredicted RBP10.33□□□□□ -0.76
VRK1-204ENST00000555351 GPR35Q9HC97 309 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 B3GAT2Q9NPZ5 323 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 SEC14L4Q9UDX3 406 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 CADP27708 2225 aa10.33□□□□□ -0.76
VRK1-204ENST00000555351 IGHV1-18A0A0C4DH31 117 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 HTR3EA5X5Y0 456 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 PLPP3O14495 311 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 ENTPD5O75356 428 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 LYPD3O95274 346 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 HPRP00739 348 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 OPN1SWP03999 348 aa10.32□□□□□ -0.76
VRK1-204ENST00000555351 THRBP10828 461 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms