RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 SGCBQ16585 318 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 MS4A18Q3C1V0 323 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 CASP12Q6UXS9 341 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 TMPPEQ6ZT21 453 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 PTCHD4Q6ZW05 846 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 BBS1Q8NFJ9 593 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 FBLIM1Q8WUP2 373 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ROBO4Q8WZ75 1007 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 MIB2Q96AX9 1013 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ERMAPQ96PL5 475 aaPredicted RBP9.63□□□□□ -0.87
TDP1-211ENST00000555178 TSPAN32Q96QS1 320 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 APOL4Q9BPW4 351 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 TAPBPLQ9BX59 468 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 HCAR1Q9BXC0 346 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 MED20Q9H944 212 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 AMBNQ9NP70 447 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 QPCTLQ9NXS2 382 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ALKBH4Q9NXW9 302 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 DNAJC27Q9NZQ0 273 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 KLHL13Q9P2N7 655 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 INTS1Q8N201 2190 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 TEX13CA0A0J9YWL9 993 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 H7C1C5 153 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 RNF13O43567 381 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 TLX2O43763 284 aaPredicted RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 HIST1H2ABP04908 130 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 HIST1H1CP16403 213 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 GTF2E2P29084 291 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 PCYT1AP49585 367 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 CTXN1P60606 82 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 LCN6P62502 163 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 KLRB1Q12918 225 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 IL18R1Q13478 541 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 MELKQ14680 651 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 ZNF362Q5T0B9 420 aaPredicted RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 C5orf46Q6UWT4 87 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 C3P1Q6ZMU1 363 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 HIST3H2AQ7L7L0 130 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 LNX2Q8N448 690 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 RPRMLQ8N4K4 120 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 CYB561A3Q8NBI2 242 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 SDR9C7Q8NEX9 313 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 OR10D3Q8NH80 312 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 FAR1Q8WVX9 515 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 HIST1H2ACQ93077 130 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 Q96M85 177 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 ASPNQ9BXN1 380 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 FN3KQ9H479 309 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 CHST11Q9NPF2 352 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 NRIP3Q9NQ35 241 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 PNPLA3Q9NST1 481 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 MRPL39Q9NYK5 338 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 B3GAT1Q9P2W7 334 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 HDGFL3Q9Y3E1 203 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 MYO7BQ6PIF6 2116 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 A0A1B0GVC2 190 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 NOS3P29474 1203 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 MAP2K6P52564 334 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 CHN2P52757 468 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 EFNB1P98172 346 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 PUDPQ08623 228 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 RPL13AP3Q6NVV1 102 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 FAM122BQ7Z309 247 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 GPAT4Q86UL3 456 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 LSM14AQ8ND56 463 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 SETD9Q8NE22 299 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 OR4K13Q8NH42 304 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 RHOXF1Q8NHV9 184 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 GPR137Q96N19 417 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 TUBA1CQ9BQE3 449 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 POLDIP3Q9BY77 421 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 HINT3Q9NQE9 182 aaKnown RBP9.62□□□□□ -0.87
TDP1-211ENST00000555178 CAMK2AQ9UQM7 478 aa9.62□□□□□ -0.87
TDP1-211ENST00000555178 SMAD9O15198 467 aaKnown RBP9.61□□□□□ -0.87
TDP1-211ENST00000555178 ENTPD6O75354 484 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 PMS2P2O95744 297 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 CLUP10909 449 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 NTF4P34130 210 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 CDH15P55291 814 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 PRPS1P60891 318 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 POU3F1Q03052 451 aaPredicted RBP9.61□□□□□ -0.87
TDP1-211ENST00000555178 RUNX1T1Q06455 604 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 PIGFQ07326 219 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 CRMP1Q14194 572 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 C6orf141Q5SZD1 244 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 HBMQ6B0K9 141 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 FAM180AQ6UWF9 173 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 B3GLCTQ6Y288 498 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 DPY19L2P2Q6ZN68 376 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 NCCRP1Q6ZVX7 275 aaPredicted RBP9.61□□□□□ -0.87
TDP1-211ENST00000555178 H1FNTQ75WM6 255 aaPredicted RBP9.61□□□□□ -0.87
TDP1-211ENST00000555178 BPIFB6Q8NFQ5 453 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 OTULINQ96BN8 352 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 LRR1Q96L50 414 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 GPX7Q96SL4 187 aaPredicted RBP9.61□□□□□ -0.87
TDP1-211ENST00000555178 SLX1AQ9BQ83 275 aa9.61□□□□□ -0.87
TDP1-211ENST00000555178 PAK1IP1Q9NWT1 392 aaPredicted RBP9.61□□□□□ -0.87
TDP1-211ENST00000555178 MED29Q9NX70 200 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms