RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 OR5T3Q8NGG3 340 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 SLC2A12Q8TD20 617 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 FRMD6Q96NE9 622 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 DGAT2Q96PD7 388 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 SIGLEC12Q96PQ1 595 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 WFDC6Q9BQY6 131 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 RSPO3Q9BXY4 272 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 VN1R1Q9GZP7 353 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 OR52D1Q9H346 318 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 FOLH1BQ9HBA9 442 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 PRTFDC1Q9NRG1 225 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 ASB6Q9NWX5 421 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 C19orf25Q9UFG5 118 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 EXOGQ9Y2C4 368 aaKnown RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 GPR55Q9Y2T6 319 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 CAB39Q9Y376 341 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-216ENST00000554975 ATRQ13535 2644 aa10.08□□□□□ -0.8
SHMT2-216ENST00000554975 IGHV3-20A0A0C4DH32 117 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 TRDV1A0A1B0GX56 115 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 A0A1W2PQ72 361 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SLC35F4A4IF30 521 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 FAM90A27PA6NNH2 459 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 E9PLN8 166 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 TBX1O43435 398 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 FCMRO60667 390 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 CTNSO60931 367 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 LDB3O75112 727 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 PPM1BO75688 479 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 IGFBP1P08833 259 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-216ENST00000554975 IFI30P13284 250 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 FUT4P22083 530 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 PTBP1P26599 531 aaKnown RBP eCLIP10.07□□□□□ -0.8
SHMT2-216ENST00000554975 LCN1P31025 176 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SDC2P34741 201 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 ATP6V1E1P36543 226 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SOX3P41225 446 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 HSD17B7P56937 341 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 RPS3AP61247 264 aaKnown RBP10.07□□□□□ -0.8
SHMT2-216ENST00000554975 PPP3R1P63098 170 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 ADAM8P78325 824 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SLC13A2Q13183 592 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 OR1Q1Q15612 314 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 FCRLBQ6BAA4 426 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SLC30A6Q6NXT4 461 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 NIPAL3Q6P499 406 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 LANCL3Q6ZV70 420 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 OLIG3Q7RTU3 272 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 NKAIN4Q8IVV8 208 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 DMRTC2Q8IXT2 367 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SHISA5Q8N114 240 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 POC5Q8NA72 575 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 MDS2Q8NDY4 140 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 TMEM255BQ8WV15 326 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SLC25A46Q96AG3 418 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 GPA33Q99795 319 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 VKORC1Q9BQB6 163 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 ANKRA2Q9H9E1 313 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 TRIM36Q9NQ86 728 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 KLHL1Q9NR64 748 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 ABCB10Q9NRK6 738 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 CMC2Q9NRP2 79 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 RPS6KB2Q9UBS0 482 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF223Q9UK11 482 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-216ENST00000554975 MRTO4Q9UKD2 239 aaKnown RBP10.07□□□□□ -0.8
SHMT2-216ENST00000554975 SLC35A3Q9Y2D2 325 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 CMAHPQ9Y471 501 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 CHST2Q9Y4C5 530 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 MMACHCQ9Y4U1 282 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 HRH3Q9Y5N1 445 aa10.07□□□□□ -0.8
SHMT2-216ENST00000554975 EML6Q6ZMW3 1958 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 NBEAL1Q6ZS30 2694 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 A0A0B4J2E0 115 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 A0A1B0GX12 115 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 PRR23D1E9PI22 279 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 TOXO94900 526 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 CBX7O95931 251 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 IGF2P01344 180 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 PRR23D2P0DMB1 279 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 SAGP10523 405 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ABOP16442 354 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 MSX1P28360 303 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 GABRA3P34903 492 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 CRYBB2P43320 205 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ETV1P50549 477 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 GAS1P54826 345 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 PSPHP78330 225 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 LGALS3BPQ08380 585 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 FGFBP1Q14512 234 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 NSDHLQ15738 373 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ZNF141Q15928 474 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 TRMT12Q53H54 448 aaKnown RBP10.06□□□□□ -0.8
SHMT2-216ENST00000554975 KRTCAP3Q53RY4 240 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 ABHD17BQ5VST6 288 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 LIPKQ5VXJ0 399 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 MZT2AQ6P582 158 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 CD200R1LQ6Q8B3 271 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 SMARCD3Q6STE5 483 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 TMEM205Q6UW68 189 aa10.06□□□□□ -0.8
SHMT2-216ENST00000554975 CPEB2Q7Z5Q1 589 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms