RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TMEM61Q8N0U2 210 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 TTC5Q8N0Z6 440 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 PNKDQ8N490 385 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 FNDC5Q8NAU1 212 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 OR2L5Q8NG80 312 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 RASD2Q96D21 266 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 IFT74Q96LB3 600 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 KCNA7Q96RP8 456 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 P2RY13Q9BPV8 354 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 NUP58Q9BVL2 599 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 FAIM2Q9BWQ8 316 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 TMEM59Q9BXS4 323 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 HES7Q9BYE0 225 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 SELENOIQ9C0D9 397 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 FAM192AQ9GZU8 254 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ZDHHC11Q9H8X9 412 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 LY9Q9HBG7 655 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 SH2D2AQ9NP31 389 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ADAP2Q9NPF8 381 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ABCB10Q9NRK6 738 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 INPP5EQ9NRR6 644 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 QPCTLQ9NXS2 382 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 MTRF1LQ9UGC7 380 aaKnown RBP2.17□□□□□ -2.06
SCFD1-213ENST00000554776 IKZF2Q9UKS7 526 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 CELA1Q9UNI1 258 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ASF1AQ9Y294 204 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF256Q9Y2P7 627 aaPredicted RBP2.17□□□□□ -2.06
SCFD1-213ENST00000554776 PEX16Q9Y5Y5 336 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 NSD2O96028 1365 aa2.17□□□□□ -2.06
SCFD1-213ENST00000554776 PSMB11A5LHX3 300 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 A8MUA0 341 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 GOSR2O14653 212 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 AGPAT2O15120 278 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 HCRTR1O43613 425 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 KLF8O95600 359 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 HPNP05981 417 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 MCF2P10911 925 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TNNI1P19237 187 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ATP5C1P36542 298 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 GLP1RP43220 463 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 SSR1P43307 286 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 KIR2DS4P43632 304 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RGRP47804 291 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ARRB1P49407 418 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 PRMT2P55345 433 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TAS2R19P59542 299 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 LYZP61626 148 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TIMM10P62072 90 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 GNB2P62879 340 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 SRSF5Q13243 272 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RCN1Q15293 331 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ATP6AP1Q15904 470 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 IL17AQ16552 155 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 NRF1Q16656 503 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 DGUOKQ16854 277 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ALKBH6Q3KRA9 238 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 EOGTQ5NDL2 527 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ARMC12Q5T9G4 340 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 C11orf71Q6IPW1 123 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TRIM40Q6P9F5 258 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 CNIH2Q6PI25 160 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TMEM107Q6UX40 140 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ZNF836Q6ZNA1 936 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 LRRC74BQ6ZQY2 392 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 PUSL1Q8N0Z8 303 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 BBS5Q8N3I7 341 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 NKAPP1Q8N9T2 125 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 DCAF4L2Q8NA75 395 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 C20orf203Q8NBC4 194 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TRPV1Q8NER1 839 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 OR10G3Q8NGC4 313 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 OR6C4Q8NGE1 309 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 OR51S1Q8NGJ8 323 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 LINC01006Q8NI28 216 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RAB3IL1Q8TBN0 382 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 SLC22A8Q8TCC7 542 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RDH5Q92781 318 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 TM4SF19Q96DZ7 209 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 PHYHIPLQ96FC7 376 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 MED8Q96G25 268 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 CYYR1Q96J86 154 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 HSFY1Q96LI6 401 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 NAP1L5Q96NT1 182 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 ZIM3Q96PE6 472 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 OR8B4Q96RC9 309 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RARRES2Q99969 163 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RASL11BQ9BPW5 248 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 RIOK1Q9BRS2 568 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 PELOQ9BRX2 385 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 CENPKQ9BS16 269 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 GBA3Q9H227 469 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 NIPAL2Q9H841 368 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 VPS37BQ9H9H4 285 aa2.16□□□□□ -2.06
SCFD1-213ENST00000554776 PSMC3IPQ9P2W1 217 aaPredicted RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 PRRC2AP48634 2157 aaKnown RBP2.16□□□□□ -2.06
SCFD1-213ENST00000554776 SMCO2A6NFE2 343 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 C12orf77C9JDV5 145 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 DLGAP1O14490 977 aa2.15□□□□□ -2.07
SCFD1-213ENST00000554776 TRAF3IP2O43734 574 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-213ENST00000554776 NPIPB7O75200 414 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms