RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CHD3Q12873 2000 aaKnown RBP9.37□□□□□ -0.91
SHMT2-213ENST00000554600 C11orf98E9PRG8 122 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 UPK3AO75631 287 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF682O95780 498 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 CH25HO95992 272 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 WNT11O96014 354 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 HPRP00739 348 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 HIST1H2ABP04908 130 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ADORA3P0DMS8 318 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 DRD4P21917 467 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 KDELR2P33947 212 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 CRYBA2P53672 197 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 CDH11P55287 796 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 PRPS1P60891 318 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ADAM8P78325 824 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 LTBQ06643 244 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 HIKESHIQ53FT3 197 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 SLC22A25Q6T423 547 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 SEZ6L2Q6UXD5 910 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 HIST3H2AQ7L7L0 130 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 SLC15A3Q8IY34 581 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 DEPDC4Q8N2C3 294 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF611Q8N823 705 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 SCAIQ8N9R8 606 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ADPRHL1Q8NDY3 354 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 C1orf162Q8NEQ5 155 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 WFDC11Q8NEX6 87 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 OR6S1Q8NH40 331 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 LZICQ8WZA0 190 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 HIST1H2ACQ93077 130 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 GTPBP3Q969Y2 492 aaKnown RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 CMTM5Q96DZ9 223 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 SLC41A3Q96GZ6 507 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 MPP4Q96JB8 637 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 MUS81Q96NY9 551 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 HOPXQ9BPY8 73 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 TMEM204Q9BSN7 226 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 CXorf56Q9H5V9 222 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 MRPL39Q9NYK5 338 aaKnown RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 GMPR2Q9P2T1 348 aaKnown RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 B3GAT1Q9P2W7 334 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 LAMP3Q9UQV4 416 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 RCE1Q9Y256 329 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 MAGED1Q9Y5V3 778 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-213ENST00000554600 SLC25A15Q9Y619 301 aa9.36□□□□□ -0.91
SHMT2-213ENST00000554600 ABCA2Q9BZC7 2435 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 NAV3Q8IVL0 2385 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 A0A096LPE4 126 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 A0A1W2PPZ6 126 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF726A6NNF4 738 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 MS4A18H0YCH9 400 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 M0R3G1 203 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PDLIM1O00151 329 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 CXCR6O00574 342 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 NME4O00746 187 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 TRAF3IP2O43734 574 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 SNX3O60493 162 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 THY1P04216 161 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 HLA-DOBP13765 273 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PTAFRP25105 342 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 IFNA8P32881 189 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 GSK3BP49841 420 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PSME3P61289 254 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 TUBA1BP68363 451 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 TUBA4AP68366 448 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PUDPQ08623 228 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PIN1Q13526 163 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 MS4A18Q3C1V0 323 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 TBRG1Q3YBR2 411 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF672Q499Z4 452 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 Q5PR19 223 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 WDR88Q6ZMY6 472 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 TUBA1AQ71U36 451 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 NANOGNBQ7Z5D8 188 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 TSPYL5Q86VY4 417 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 C17orf78Q8N4C9 275 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PIK3C3Q8NEB9 887 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 OR1K1Q8NGR3 316 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 OR5J2Q8NH18 312 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 SMAP2Q8WU79 429 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 FAM162AQ96A26 154 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 RADILQ96JH8 1075 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PIP5K1AQ99755 562 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 KCTD14Q9BQ13 255 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 EMC6Q9BV81 110 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 PCDHAC1Q9H158 963 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 MYLK2Q9H1R3 596 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 ALG2Q9H553 416 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 B3GAT2Q9NPZ5 323 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 NANSQ9NR45 359 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 MED29Q9NX70 200 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 CISD1Q9NZ45 108 aaKnown RBP9.35□□□□□ -0.91
SHMT2-213ENST00000554600 RIMS3Q9UJD0 308 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 MGAT4BQ9UQ53 548 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 NOX1Q9Y5S8 564 aa9.35□□□□□ -0.91
SHMT2-213ENST00000554600 SLC35F4A4IF30 521 aa9.34□□□□□ -0.91
SHMT2-213ENST00000554600 PLPP3O14495 311 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms