RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 LOC390937A0A1W2PQ73 354 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 CBY3A6NI87 242 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 C17orf51A8MQB3 221 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TRIM77I1YAP6 450 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 SMAD9O15198 467 aaKnown RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 SLC25A17O43808 307 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 DOK2O60496 412 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 BANF1O75531 89 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PGM3O95394 542 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 NTN1O95631 604 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF17P17021 662 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF23P17027 643 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 GGT1P19440 569 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 EDN2P20800 178 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PCMT1P22061 227 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PTAFRP25105 342 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ELK3P41970 407 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 MAPK12P53778 367 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF91Q05481 1191 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 SLC18A2Q05940 514 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 C17orf67Q0P5P2 114 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 STX5Q13190 355 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 SCGB2A2Q13296 93 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 STK11Q15831 433 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ALG10Q5BKT4 473 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF628Q5EBL2 1059 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ALG10BQ5I7T1 473 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TCHHL1Q5QJ38 904 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PIK3CD-AS1Q5SR53 167 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 LGSNQ5TDP6 509 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 SERTAD4-AS1Q5TG53 156 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 STEAP4Q687X5 459 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 HBMQ6B0K9 141 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 CCDC137Q6PK04 289 aaKnown RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 UGT2A3Q6UWM9 527 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 NPSR1Q6W5P4 371 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 DEF8Q6ZN54 512 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 Q6ZT83 130 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 NUFIP2Q7Z417 695 aaKnown RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PXKQ7Z7A4 578 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ISCA2Q86U28 154 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 MARCH3Q86UD3 253 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 GPAT4Q86UL3 456 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM139Q8IV31 216 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TUSC5Q8IXB3 177 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PDIK1LQ8N165 341 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 GTPBP8Q8N3Z3 284 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TEX9Q8N6V9 391 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TRIM58Q8NG06 486 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 WDR20Q8TBZ3 569 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF675Q8TD23 568 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF418Q8TF45 676 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 GRK7Q8WTQ7 553 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 UBTD2Q8WUN7 234 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TMEM170AQ8WVE7 144 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 KCTD4Q8WVF5 259 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 EFHD2Q96C19 240 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TM4SF18Q96CE8 201 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 LRRC39Q96DD0 335 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 CFAP36Q96G28 342 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ZNF681Q96N22 645 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 FOXN4Q96NZ1 517 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 INPP5KQ9BT40 448 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 PRSS22Q9GZN4 317 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 MYOZ1Q9NP98 299 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 FAM120CQ9NX05 1096 aaKnown RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 TAS2R9Q9NYW1 312 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 NUDT4Q9NZJ9 180 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 MRTO4Q9UKD2 239 aaKnown RBP4.23□□□□□ -1.73
ATXN3-228ENST00000554592 ACOT9Q9Y305 439 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 FKBP7Q9Y680 259 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 EML6Q6ZMW3 1958 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 NCKAP5O14513 1909 aa4.23□□□□□ -1.73
ATXN3-228ENST00000554592 MED12Q93074 2177 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 OR5H1A6NKK0 313 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 DNALI1O14645 258 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 TNFSF11O14788 317 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PLOD3O60568 738 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PTP4A3O75365 173 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 NME6O75414 186 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 LYZL6O75951 148 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 LY6HO94772 140 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 SEC31AO94979 1220 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CLDN9O95484 217 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 OPN1LWP04000 364 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 H2AFXP16104 143 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 STMN1P16949 149 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 ME2P23368 584 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PSMA4P25789 261 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 OR3A2P47893 321 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PSMD4P55036 377 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 TRA2BP62995 288 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 LGALS3BPQ08380 585 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
ATXN3-228ENST00000554592 MORF4L2Q15014 288 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 PPP1R7Q15435 360 aa4.22□□□□□ -1.73
ATXN3-228ENST00000554592 TAF11Q15544 211 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms