RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TRAF3IP2O43734 574 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 AKAP8O43823 692 aaKnown RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 SLC43A1O75387 559 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 ZNF432O94892 652 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 THY1P04216 161 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 DANCRP0C864 163 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 COX4I1P13073 169 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 CD99P14209 185 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 FOSL1P15407 271 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 ZNF43P17038 809 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 GRPRP30550 384 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 SELENOPP49908 381 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 LTBQ06643 244 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 FOXD4Q12950 439 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 MS4A18Q3C1V0 323 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 ALKBH2Q6NS38 261 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 C8orf82Q6P1X6 216 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 NIPAL3Q6P499 406 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 KLHL17Q6TDP4 642 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 PRSS57Q6UWY2 283 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 TMEM108Q6UXF1 575 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 HACD2Q6Y1H2 254 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 WDR88Q6ZMY6 472 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 SPATA21Q7Z572 469 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 MICU2Q8IYU8 434 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 WDR31Q8NA23 367 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 WFDC11Q8NEX6 87 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 KBTBD8Q8NFY9 601 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 OR2T12Q8NG77 320 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 OR52N5Q8NH56 324 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 VANGL1Q8TAA9 524 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 MAGEE2Q8TD90 523 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 TMEM171Q8WVE6 324 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 PROX1Q92786 737 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 RCN3Q96D15 328 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 RADILQ96JH8 1075 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 ASPNQ9BXN1 380 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 SLC19A3Q9BZV2 496 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 MYLK2Q9H1R3 596 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 CXorf56Q9H5V9 222 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 OBP2BQ9NPH6 170 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 SLC17A5Q9NRA2 495 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 ZNF701Q9NV72 531 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 MRPL39Q9NYK5 338 aaKnown RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 BAG5Q9UL15 447 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 SLC7A7Q9UM01 511 aa6.6□□□□□ -1.35
LINC00640-201ENST00000554409 MAGED1Q9Y5V3 778 aaPredicted RBP6.6□□□□□ -1.35
LINC00640-201ENST00000554409 ARPC4-TTLL3A0A0A6YYG9 625 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 ELOVL7A1L3X0 281 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 OVOL3O00110 214 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 ABCD4O14678 606 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 CLOCKO15516 846 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 UPK3AO75631 287 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 KRT33AO76009 404 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 WNT11O96014 354 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 HPRP00739 348 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 IGF2P01344 180 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 NQO1P15559 274 aaKnown RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 CD40P25942 277 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 PRDX6P30041 224 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 KDELR2P33947 212 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 RBM34P42696 430 aaKnown RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 PTH2RP49190 550 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 SH3BGRP55822 239 aaPredicted RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 CLDN17P56750 224 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 PRPS1P60891 318 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 RPS4XP62701 263 aaKnown RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 SLC25A3Q00325 362 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 LGALS3BPQ08380 585 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 PUDPQ08623 228 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 C1DQ13901 141 aaKnown RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 C3orf36Q3SXR2 165 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 Q5PR19 223 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 C9orf135Q5VTT2 229 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 TTC33Q6PID6 262 aaPredicted RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 NHLRC1Q6VVB1 395 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 LINGO2Q7L985 606 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 PXKQ7Z7A4 578 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 DTX2Q86UW9 622 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 CARM1Q86X55 608 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 RBM45Q8IUH3 476 aaKnown RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 P3H2Q8IVL5 708 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 UEVLDQ8IX04 471 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 SLC15A3Q8IY34 581 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 TMEM123Q8N131 208 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 KDM8Q8N371 416 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 POU5F2Q8N7G0 328 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 OR1K1Q8NGR3 316 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 OR5J2Q8NH18 312 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 ZNF837Q96EG3 531 aaPredicted RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 LRR1Q96L50 414 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 MOGAT1Q96PD6 335 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 ALKBH3Q96Q83 286 aaPredicted RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 OR2M2Q96R28 347 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 HOPXQ9BPY8 73 aaPredicted RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 PRSS27Q9BQR3 290 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 NSRP1Q9H0G5 558 aaKnown RBP6.59□□□□□ -1.35
LINC00640-201ENST00000554409 EFCAB1Q9HAE3 211 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 FAIMQ9NVQ4 179 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms