RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ALG10BQ5I7T1 473 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 ULK3Q6PHR2 472 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 VHLLQ6RSH7 139 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 CCDC36Q8IYA8 594 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF417Q8TAU3 575 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 SPDL1Q96EA4 605 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 SLC47A1Q96FL8 570 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF587Q96SQ5 575 aaPredicted RBP16.31■□□□□ 0.2
CPSF2-203ENST00000554290 SHARPINQ9H0F6 387 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 NELFAQ9H3P2 528 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 GPR35Q9HC97 309 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 CCDC167Q9P0B6 97 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 B3GAT1Q9P2W7 334 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 SEC14L4Q9UDX3 406 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 CORO2BQ9UQ03 480 aa16.31■□□□□ 0.2
CPSF2-203ENST00000554290 MXRA5Q9NR99 2828 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 LOC390937A0A1W2PQ73 354 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 VWC2LB2RUY7 222 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 IGKV3-15P01624 115 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 GRPRP30550 384 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 ARR3P36575 388 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 NR4A2P43354 598 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 IDH3AP50213 366 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 GGTLC2Q14390 218 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 CARTPTQ16568 116 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 CEACAM16Q2WEN9 425 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 FAM91A1Q658Y4 838 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 MSRB3Q8IXL7 192 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 NUP37Q8NFH4 326 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 BHLHE22Q8NFJ8 381 aaPredicted RBP16.3■□□□□ 0.2
CPSF2-203ENST00000554290 RNF217Q8TC41 542 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 LRRC8CQ8TDW0 803 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF607Q96SK3 696 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 EPYCQ99645 322 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 PLK3Q9H4B4 646 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 TMEM27Q9HBJ8 222 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 CRLF2Q9HC73 371 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 TESQ9UGI8 421 aaKnown RBP16.3■□□□□ 0.2
CPSF2-203ENST00000554290 SLC13A4Q9UKG4 626 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 GMEB1Q9Y692 573 aa16.3■□□□□ 0.2
CPSF2-203ENST00000554290 FBN3Q75N90 2809 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 DNHD1Q96M86 4753 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 EVPLLA8MZ36 301 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 LMX1BO60663 402 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 SERPINB7O75635 380 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ERCC1P07992 297 aaPredicted RBP16.29■□□□□ 0.2
CPSF2-203ENST00000554290 NQO1P15559 274 aaKnown RBP16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF16P17020 682 aaPredicted RBP16.29■□□□□ 0.2
CPSF2-203ENST00000554290 CBLP22681 906 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 SLC6A2P23975 617 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 HTR2AP28223 471 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 PPOXP50336 477 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 BEND6Q5SZJ8 279 aaPredicted RBP16.29■□□□□ 0.2
CPSF2-203ENST00000554290 UEVLDQ8IX04 471 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF540Q8NDQ6 660 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ADPRHL1Q8NDY3 354 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 IL17RDQ8NFM7 739 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 OR6S1Q8NH40 331 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ANKRD27Q96NW4 1050 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 FOXN4Q96NZ1 517 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 OR2M2Q96R28 347 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 CCDC28BQ9BUN5 200 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 RAB1BQ9H0U4 201 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 TMEM38AQ9H6F2 299 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF442Q9H7R0 627 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 EVA1AQ9H8M9 152 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 CORINQ9Y5Q5 1042 aa16.29■□□□□ 0.2
CPSF2-203ENST00000554290 IGKV1D-42A0A075B6H8 117 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 ZNF99A8MXY4 864 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-203ENST00000554290 TPST1O60507 370 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 NPR2P20594 1047 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 CALCRP30988 508 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 IDH3GP51553 393 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-203ENST00000554290 RGS8P57771 180 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-203ENST00000554290 SCARB2Q14108 478 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 PAGE3Q5JUK9 113 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 AGBL2Q5U5Z8 902 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 FAM166AQ6J272 317 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 TMEM123Q8N131 208 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 ASPNQ9BXN1 380 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 RSPO3Q9BXY4 272 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-203ENST00000554290 SEC61A2Q9H9S3 476 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 B3GAT2Q9NPZ5 323 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 VAPAQ9P0L0 249 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 SLAMF8Q9P0V8 285 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 KLHL14Q9P2G3 628 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.28■□□□□ 0.2
CPSF2-203ENST00000554290 KCNS2Q9ULS6 477 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 RTTNQ86VV8 2226 aa16.28■□□□□ 0.2
CPSF2-203ENST00000554290 A0A087WUJ7 227 aa16.27■□□□□ 0.2
CPSF2-203ENST00000554290 LOC100289279A0A1B0GTE1 492 aa16.27■□□□□ 0.2
CPSF2-203ENST00000554290 M0R3G1 203 aa16.27■□□□□ 0.2
CPSF2-203ENST00000554290 TRAF3IP2O43734 574 aaPredicted RBP16.27■□□□□ 0.2
CPSF2-203ENST00000554290 APEHP13798 732 aaKnown RBP16.27■□□□□ 0.2
CPSF2-203ENST00000554290 GPX2P18283 190 aa16.27■□□□□ 0.2
CPSF2-203ENST00000554290 THBS4P35443 961 aa16.27■□□□□ 0.2
CPSF2-203ENST00000554290 CAPZA2P47755 286 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms