RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 LRRTM4Q86VH4 590 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 UMODL1-AS1Q8N2C9 162 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ZNF610Q8N9Z0 462 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 OR2L8Q8NGY9 312 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 SECTM1Q8WVN6 248 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HPSE2Q8WWQ2 592 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 PSMG2Q969U7 264 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 NTNG2Q96CW9 530 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 GFI1Q99684 422 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 MICU1Q9BPX6 476 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 MED10Q9BTT4 135 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ZNF426Q9BUY5 554 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 OR51I1Q9H343 314 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 GLRX2Q9NS18 164 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 COMMD9Q9P000 198 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ZNF219Q9P2Y4 722 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 OR14J1Q9UGF5 321 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 CHRNA9Q9UGM1 479 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 NUP210Q8TEM1 1887 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 TEX13DA0A0J9YY54 714 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 GNG14A0A1W2PPG7 69 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 C9J4A7 227 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HOXA2O43364 376 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BKO60814 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ADAP1O75689 374 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 CBR3O75828 277 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 PMS2P2O95744 297 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BJP06899 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 TYMPP19971 482 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 GSTM3P21266 225 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 NT5EP21589 574 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 LPOP22079 712 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BOP23527 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BBP33778 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 FAUP35544 74 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 LPAR6P43657 344 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BDP58876 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BCP62807 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 RPS15P62841 145 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 AIMP2Q13155 320 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 JOSD1Q15040 202 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 RHEBQ15382 184 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 TAF13Q15543 124 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST2H2BEQ16778 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ZXDCQ2QGD7 858 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 LRRC37A5PQ49AS3 106 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 STPG1Q5TH74 334 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 FRG2Q64ET8 278 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 MRM1Q6IN84 353 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 REEP3Q6NUK4 255 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 FRRS1Q6ZNA5 592 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 TAS1R1Q7RTX1 841 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 GLT6D1Q7Z4J2 308 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 MEX3DQ86XN8 651 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 ZBTB2Q8N680 514 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ACBD7Q8N6N7 88 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ACBD4Q8NC06 268 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 OR4E2Q8NGC2 313 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 IFI44Q8TCB0 444 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 ADAMTS17Q8TE56 1095 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 PPP1R1CQ8WVI7 109 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 RGP1Q92546 391 aaPredicted RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BHQ93079 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 MRGPRX4Q96LA9 322 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 WDR92Q96MX6 357 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 SMIM14Q96QK8 99 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 FRG2BQ96QU4 278 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BNQ99877 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 HIST1H2BMQ99879 126 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 SELENOIQ9C0D9 397 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 SPACA1Q9HBV2 294 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 AK6Q9Y3D8 172 aaKnown RBP8.76□□□□□ -1.01
SIX4-202ENST00000554079 MTCH2Q9Y6C9 303 aa8.76□□□□□ -1.01
SIX4-202ENST00000554079 M0R143 59 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 PPP1R2P9O14990 202 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 OGG1O15527 345 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 GPR39O43194 453 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 MT-ND5P03915 603 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 ITGB2P05107 769 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 SPARCP09486 303 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 FABP4P15090 132 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 APLNRP35414 380 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 RBM34P42696 430 aaKnown RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 PCBP4P57723 403 aaKnown RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 RPS23P62266 143 aaKnown RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 PTSQ03393 145 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 NFATC2Q13469 925 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 PIN1Q13526 163 aaPredicted RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 C14orf28Q4W4Y0 310 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 PDZD11Q5EBL8 140 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 DMRTA1Q5VZB9 504 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 DMKNQ6E0U4 476 aaPredicted RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 OVCH1Q7RTY7 1134 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 LRRC70Q7Z2Q7 622 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 ADCK2Q7Z695 626 aa8.75□□□□□ -1.01
SIX4-202ENST00000554079 THOC6Q86W42 341 aaKnown RBP8.75□□□□□ -1.01
SIX4-202ENST00000554079 THNSL2Q86YJ6 484 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms