RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ROPN1LQ96C74 230 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 CCDC126Q96EE4 140 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 SLC35G5Q96KT7 338 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 OR2M2Q96R28 347 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 SLC38A1Q9H2H9 487 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 PRDM13Q9H4Q3 707 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 MMP26Q9NRE1 261 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 SEC14L4Q9UDX3 406 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 RASD1Q9Y272 281 aa7.69□□□□□ -1.18
PRKCH-208ENST00000553846 SOX21Q9Y651 276 aaPredicted RBP7.69□□□□□ -1.18
PRKCH-208ENST00000553846 IGHV1-69-2A0A0G2JMI3 117 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF500O60304 480 aaPredicted RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 PLIN3O60664 434 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 SLC43A1O75387 559 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 CRCPO75575 148 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 CLPTM1O96005 669 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 CHRM4P08173 479 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ABHD2P08910 425 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 OR12D1P0DN82 309 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 MYL2P10916 166 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 PNMTP11086 282 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF250P15622 560 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF12P17014 697 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 OMGP23515 440 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 CCL8P80075 99 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 LCN2P80188 198 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 EGR4Q05215 589 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 BNIP2Q12982 314 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 BAMBIQ13145 260 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 MAPK11Q15759 364 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 GALNTL6Q49A17 601 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 MRPL2Q5T653 305 aaKnown RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 PRAMEF8Q5VWM4 474 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 PRAMEF7Q5VXH5 474 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 C16orf62Q7Z3J2 963 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 KDM8Q8N371 416 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 PAQR4Q8N4S7 273 aaPredicted RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 RAB8BQ92930 207 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 DACT3Q96B18 629 aaPredicted RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 C3orf30Q96M34 536 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 RBM4BQ9BQ04 359 aaKnown RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ATAD3AQ9NVI7 634 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ADPRHL2Q9NX46 363 aa7.68□□□□□ -1.18
PRKCH-208ENST00000553846 PURGQ9UJV8 347 aaKnown RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF346Q9UL40 294 aaKnown RBP7.68□□□□□ -1.18
PRKCH-208ENST00000553846 LOC102725191A0A1B0GVB3 256 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 CFAP73A6NFT4 308 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 A8MVM7 634 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TMEM114B3SHH9 223 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TRAPPC2LH3BP13 241 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 HMGN4O00479 90 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 LYPLA1O75608 230 aaPredicted RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TSPAN15O95858 294 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 PLATP00750 562 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 FGF4P08620 206 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TFPTP0C1Z6 253 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 PRPS1L1P21108 318 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 ARRB2P32121 409 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 SOAT1P35610 550 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 ATP4BP51164 291 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 CLDN17P56750 224 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 RPS23P62266 143 aaKnown RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 PAX2Q02962 417 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 ZNF154Q13106 437 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 HNRNPA0Q13151 305 aaKnown RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 GSTA3Q16772 222 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 GSG1Q2KHT4 349 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 BEAN1Q3B7T3 259 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 PCGF3Q3KNV8 242 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 C6orf136Q5SQH8 315 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 C1orf140Q5VVS0 124 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TMEM225Q6GV28 225 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TNFAIP8L2Q6P589 184 aaPredicted RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 RBMS3Q6XE24 437 aaKnown RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 C20orf196Q8IYI0 205 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 FGFBP3Q8TAT2 258 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TWIST2Q8WVJ9 160 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 TRIM44Q96DX7 344 aaPredicted RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 NEURL3Q96EH8 262 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 GPA33Q99795 319 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 DUSP26Q9BV47 211 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 HINT3Q9NQE9 182 aaKnown RBP7.67□□□□□ -1.18
PRKCH-208ENST00000553846 EXD2Q9NVH0 621 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 RLIMQ9NVW2 624 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 SLC7A8Q9UHI5 535 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 CHST2Q9Y4C5 530 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 NOTCH3Q9UM47 2321 aa7.67□□□□□ -1.18
PRKCH-208ENST00000553846 DYNC2H1Q8NCM8 4307 aaKnown RBP7.66□□□□□ -1.18
PRKCH-208ENST00000553846 A0A087WUV0 522 aaPredicted RBP7.66□□□□□ -1.18
PRKCH-208ENST00000553846 A0A1B0GUS0 222 aa7.66□□□□□ -1.18
PRKCH-208ENST00000553846 EXOC1LA0A1B0GW35 172 aa7.66□□□□□ -1.18
PRKCH-208ENST00000553846 CDHR4A6H8M9 788 aa7.66□□□□□ -1.18
PRKCH-208ENST00000553846 A8MXK9 166 aa7.66□□□□□ -1.18
PRKCH-208ENST00000553846 CLDN25C9JDP6 229 aa7.66□□□□□ -1.18
PRKCH-208ENST00000553846 M0QZ24 198 aa7.66□□□□□ -1.18
PRKCH-208ENST00000553846 RNASET2O00584 256 aaKnown RBP7.66□□□□□ -1.18
PRKCH-208ENST00000553846 UBOX5O94941 541 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms