RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 HDAC3O15379 428 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 HNRNPCL1O60812 293 aaKnown RBP8.6□□□□□ -1.03
ACTN1-210ENST00000553779 SEC14L2O76054 403 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 C1QCP02747 245 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 CELA3BP08861 270 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 HNRNPCL4P0DMR1 293 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 CD79AP11912 226 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 THBS2P35442 1172 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 THBS4P35443 961 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 ARR3P36575 388 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 STX1BP61266 288 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 ARF1P84077 181 aaKnown RBP8.6□□□□□ -1.03
ACTN1-210ENST00000553779 GALK2Q01415 458 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 SCGB2A2Q13296 93 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 DAG1Q14118 895 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 EFNB3Q15768 340 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 CEACAM16Q2WEN9 425 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 C3orf36Q3SXR2 165 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 KRT80Q6KB66 452 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 UGT2A3Q6UWM9 527 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 SNX32Q86XE0 403 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 UEVLDQ8IX04 471 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 KDM8Q8N371 416 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 LINC01356Q8N9X3 169 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 MFSD8Q8NHS3 518 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 SLC38A5Q8WUX1 472 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 SPATA9Q9BWV2 254 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 ASPNQ9BXN1 380 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 LINC00470Q9BZP3 86 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 TPK1Q9H3S4 243 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 WDR55Q9H6Y2 383 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-210ENST00000553779 TPT1P8Q9HAU6 139 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 CMAHPQ9Y471 501 aa8.6□□□□□ -1.03
ACTN1-210ENST00000553779 IGHV2OR16-5A0A0B4J2B6 119 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 TMEM229AB2RXF0 380 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 SLCO1B7G3V0H7 640 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 M0R082 166 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 M0R3G1 203 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 OR2T1O43869 369 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 SERPINI2O75830 405 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 STAMBPO95630 424 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 RAB36O95755 333 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 ADRA2AP08913 450 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 PRG2P13727 222 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 HOXB1P14653 301 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 CBLP22681 906 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 IL12AP29459 219 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 CALCRP30988 508 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 ACAA2P42765 397 aaKnown RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 GYS2P54840 703 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 RPS23P62266 143 aaKnown RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 HOXC5Q00444 222 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 MST1LQ2TV78 715 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 TRMT5Q32P41 509 aaKnown RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 PDCD4Q53EL6 469 aaKnown RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 AP1ARQ63HQ0 302 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 REP15Q6BDI9 236 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 C5orf46Q6UWT4 87 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 CROCCP2Q86T23 111 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 MDP1Q86V88 176 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 KRT73Q86Y46 540 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 EPHX4Q8IUS5 362 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 MIER2Q8N344 545 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 CLIP4Q8N3C7 705 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 RFLNBQ8N5W9 214 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 NUP37Q8NFH4 326 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 IL17RDQ8NFM7 739 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 BBS10Q8TAM1 723 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 ZNF417Q8TAU3 575 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 MAGEE2Q8TD90 523 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 UBASH3BQ8TF42 649 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 HPS1Q92902 700 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 OXGR1Q96P68 337 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 ZNF587Q96SQ5 575 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 EPYCQ99645 322 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 TMEM109Q9BVC6 243 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 SPATA5L1Q9BVQ7 753 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 C20orf27Q9GZN8 174 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 NARFLQ9H6Q4 476 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 ZNF442Q9H7R0 627 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 SEC61A2Q9H9S3 476 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 GPR35Q9HC97 309 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 THAP1Q9NVV9 213 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 NKIRAS1Q9NYS0 192 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-210ENST00000553779 POFUT2Q9Y2G5 429 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 GPR45Q9Y5Y3 372 aa8.59□□□□□ -1.03
ACTN1-210ENST00000553779 DSPPQ9NZW4 1301 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 A0A1W2PPW3 197 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 M0R233 179 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 UBDO15205 165 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 ZNF432O94892 652 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 CBR1P16152 277 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 GRPRP30550 384 aa8.58□□□□□ -1.04
ACTN1-210ENST00000553779 RGS8P57771 180 aaPredicted RBP8.58□□□□□ -1.04
ACTN1-210ENST00000553779 ACTG1P63261 375 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms