RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ACANP16112 2415 aa14.41□□□□□ -0.1
ACTN1-209ENST00000553659 A0A0B4J2E0 115 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 A0A1B0GX12 115 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 ANKRD33BA6NCL7 494 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 SERINC4A6NH21 518 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 CLDN24A6NM45 220 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 TRIM3O75382 744 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-209ENST00000553659 INMTO95050 263 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 RCBTB2O95199 551 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 CLPSP04118 112 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 FOSL1P15407 271 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 GDF1P27539 372 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 MASP1P48740 699 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 CTBP2P56545 445 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 PRKCDQ05655 676 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 ST3GAL4Q11206 333 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 IRF3Q14653 427 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 DAZAP2Q15038 168 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-209ENST00000553659 SNAPC1Q16533 368 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 KLHL22Q53GT1 634 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 HLA-DQA1Q5Y7H0 255 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 ZNF620Q6ZNG0 422 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 P2RY8Q86VZ1 359 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 NKAIN4Q8IVV8 208 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 NRMQ8IXM6 262 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 C17orf47Q8NEP4 570 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 OR2T33Q8NG76 320 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 OR52L1Q8NGH7 329 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 TMEM163Q8TC26 289 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 RFKQ969G6 155 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 MBD6Q96DN6 1003 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 YIPF6Q96EC8 236 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 FAM46AQ96IP4 442 aaKnown RBP14.4□□□□□ -0.1
ACTN1-209ENST00000553659 LCORQ96JN0 433 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-209ENST00000553659 GAL3ST4Q96RP7 486 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 TIMP4Q99727 224 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 WWTR1Q9GZV5 400 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 EXOSC3Q9NQT5 275 aaKnown RBP14.4□□□□□ -0.1
ACTN1-209ENST00000553659 UBQLN4Q9NRR5 601 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 TBC1D23Q9NUY8 699 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 FBXO34Q9NWN3 711 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 TVP23BQ9NYZ1 205 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 AASSQ9UDR5 926 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 BAIAP2Q9UQB8 552 aa14.4□□□□□ -0.1
ACTN1-209ENST00000553659 ANKHD1Q8IWZ3 2542 aaKnown RBP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 NPIPA5A0A0B4J1W7 369 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 CENPVL1A0A0U1RR11 272 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 UNC119BA6NIH7 251 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 NPIPA7E9PJI5 369 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 TO15178 435 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 ENTPD6O75354 484 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 IL2RAP01589 272 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 THY1P04216 161 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 NPIPA8P0DM63 369 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 HTR2AP28223 471 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 MAP2K4P45985 399 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 RFX3P48380 749 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 COPZ1P61923 177 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 CRYZQ08257 329 aaKnown RBP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 EBPQ15125 230 aaKnown RBP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 ACSF3Q4G176 576 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 ULK3Q6PHR2 472 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 POMZP3Q6PJE2 187 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 LINC00299Q6ZSB3 139 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 TMPRSS11FQ6ZWK6 438 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 ZNF614Q8N883 585 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 TCEANCQ8N8B7 351 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 TMEM255BQ8WV15 326 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 DNAJA4Q8WW22 397 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 HSPBAP1Q96EW2 488 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 TMEM80Q96HE8 168 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 PLEKHA8Q96JA3 519 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 PRSS27Q9BQR3 290 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 DLL4Q9NR61 685 aa14.39□□□□□ -0.11
ACTN1-209ENST00000553659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACTN1-209ENST00000553659 ZNF469Q96JG9 3925 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-209ENST00000553659 KDM4EB2RXH2 506 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-209ENST00000553659 SCDO00767 359 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 TP53I11O14683 189 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 PRODHO43272 600 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 LYPD3O95274 346 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 BCL10O95999 233 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 CSTAP01040 98 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 IGF2P01344 180 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 IGKV1D-16P01601 117 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 GKN3PP0CG01 181 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 HPGDP15428 266 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 BMP7P18075 431 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 PCSK6P29122 969 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 GRK5P34947 590 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 ADAM8P78325 824 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 EFNB1P98172 346 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 HOXC5Q00444 222 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 PGGHGQ32M88 737 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 TIMM50Q3ZCQ8 353 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 KIF18BQ86Y91 864 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 PM20D2Q8IYS1 436 aa14.38□□□□□ -0.11
ACTN1-209ENST00000553659 CNOT9Q92600 299 aaKnown RBP14.38□□□□□ -0.11
ACTN1-209ENST00000553659 TP53INP1Q96A56 240 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms