RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MS4A4EQ96PG1 132 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 TMEM246Q9BRR3 403 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 RIOK1Q9BRS2 568 aaKnown RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 PLGRKTQ9HBL7 147 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 TM9SF3Q9HD45 589 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 NMRK1Q9NWW6 199 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 DCAF16Q9NXF7 216 aa3.52□□□□□ -1.85
SYNE2-210ENST00000553455 MTRF1LQ9UGC7 380 aaKnown RBP3.52□□□□□ -1.85
SYNE2-210ENST00000553455 CCDC169A6NNP5 214 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 C12orf77C9JDV5 145 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 FAM189A1O60320 539 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 UBTFL1P0CB47 393 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-210ENST00000553455 KITLGP21583 273 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 HNRNPH3P31942 346 aaKnown RBP3.51□□□□□ -1.85
SYNE2-210ENST00000553455 FDFT1P37268 417 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 TIMM10P62072 90 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 SSX2Q16385 188 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 PAGE3Q5JUK9 113 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 GPR157Q5UAW9 335 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 NANOGNBQ7Z5D8 188 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 MFSD6LQ8IWD5 586 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 FNDC5Q8NAU1 212 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 SUMF2Q8NBJ7 301 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 OR56B2PQ8NGI1 322 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 SLC2A14Q8TDB8 520 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 SLC35E1Q96K37 410 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 PKIBQ9C010 78 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 DEFB127Q9H1M4 99 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 NXF3Q9H4D5 531 aaKnown RBP3.51□□□□□ -1.85
SYNE2-210ENST00000553455 MMP26Q9NRE1 261 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 KCNIP1Q9NZI2 227 aa3.51□□□□□ -1.85
SYNE2-210ENST00000553455 FAM47DPA6NHR8 397 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 FGF1P05230 155 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 CRYGBP07316 175 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 CMA1P23946 247 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 PRDX3P30048 256 aaKnown RBP3.5□□□□□ -1.85
SYNE2-210ENST00000553455 GDI1P31150 447 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 CASP14P31944 242 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 IRX3P78415 501 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-210ENST00000553455 ENPEPQ07075 957 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 PDIA2Q13087 525 aaKnown RBP3.5□□□□□ -1.85
SYNE2-210ENST00000553455 NRF1Q16656 503 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 PAQR7Q86WK9 346 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 PLA2G4DQ86XP0 818 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 TMEM61Q8N0U2 210 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 DCAF4L2Q8NA75 395 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 KCNG3Q8TAE7 436 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 FANK1Q8TC84 345 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 SMARCD2Q92925 531 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 MYDGFQ969H8 173 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 IFT74Q96LB3 600 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 OR8B4Q96RC9 309 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 CCDC77Q9BR77 488 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 RIOK2Q9BVS4 552 aaKnown RBP3.5□□□□□ -1.85
SYNE2-210ENST00000553455 OR11A1Q9GZK7 315 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 GBA3Q9H227 469 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 SRMSQ9H3Y6 488 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 CCL28Q9NRJ3 127 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 KLHL28Q9NXS3 571 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 ANAPC11Q9NYG5 84 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 SPATA7Q9P0W8 599 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 IKZF2Q9UKS7 526 aa3.5□□□□□ -1.85
SYNE2-210ENST00000553455 CSDC2Q9Y534 153 aaKnown RBP3.5□□□□□ -1.85
SYNE2-210ENST00000553455 MEGF6O75095 1541 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 CDHR2Q9BYE9 1310 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 GTF3C1Q12789 2109 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 GOLGA8OA6NCC3 632 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 GOLGA8NF8WBI6 632 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 MOSP00540 346 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 IGHV2-5P01817 119 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 ICAM2P13598 275 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 ZNF17P17021 662 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 FMO3P31513 532 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 NPBWR2P48146 333 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 PRMT2P55345 433 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 KIAA0087Q14695 138 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 CYTH1Q15438 398 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 RNASEKQ6P5S7 137 aaKnown RBP3.49□□□□□ -1.85
SYNE2-210ENST00000553455 TRIM40Q6P9F5 258 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 ACP7Q6ZNF0 438 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 LRRC74BQ6ZQY2 392 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 C19orf35Q6ZS72 473 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 RAB3IL1Q8TBN0 382 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 RASD2Q96D21 266 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 MBOAT4Q96T53 435 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 NRIP2Q9BQI9 281 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 PELOQ9BRX2 385 aaKnown RBP3.49□□□□□ -1.85
SYNE2-210ENST00000553455 GPR61Q9BZJ8 451 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 SIAEQ9HAT2 523 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 ADAP2Q9NPF8 381 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 IL26Q9NPH9 171 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 ABCB10Q9NRK6 738 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 CALYQ9NYX4 217 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 CELA1Q9UNI1 258 aa3.49□□□□□ -1.85
SYNE2-210ENST00000553455 FANCIQ9NVI1 1328 aa3.48□□□□□ -1.85
SYNE2-210ENST00000553455 CCDC182A6NF36 153 aa3.48□□□□□ -1.85
SYNE2-210ENST00000553455 PSTPIP1O43586 416 aa3.48□□□□□ -1.85
SYNE2-210ENST00000553455 TNFSF13O75888 250 aa3.48□□□□□ -1.85
SYNE2-210ENST00000553455 MCF2P10911 925 aa3.48□□□□□ -1.85
SYNE2-210ENST00000553455 CCNE1P24864 410 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms