RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 ZP4Q12836 540 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 FAPQ12884 760 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 C1DQ13901 141 aaKnown RBP16.26■□□□□ 0.19
CPSF2-202ENST00000553427 TSC22D1Q15714 1073 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 TIMM23BQ5SRD1 257 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 C17orf78Q8N4C9 275 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 ANKK1Q8NFD2 765 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 TMEM255BQ8WV15 326 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 ZC3HAV1LQ96H79 300 aaKnown RBP16.26■□□□□ 0.19
CPSF2-202ENST00000553427 C1orf21Q9H246 121 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 MAN2C1Q9NTJ4 1040 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 MED31Q9Y3C7 131 aa16.26■□□□□ 0.19
CPSF2-202ENST00000553427 OR5H1A6NKK0 313 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 KPNA4O00629 521 aaPredicted RBP16.25■□□□□ 0.19
CPSF2-202ENST00000553427 KLF4O43474 513 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 NR1H2P55055 460 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 CLDN17P56750 224 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 TGFBR3Q03167 851 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 TRAM2Q15035 370 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 TAB1Q15750 504 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 OR7E24Q6IFN5 339 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 NIPAL3Q6P499 406 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 SEZ6L2Q6UXD5 910 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 TSEN54Q7Z6J9 526 aaKnown RBP16.25■□□□□ 0.19
CPSF2-202ENST00000553427 CYP4Z1Q86W10 505 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 TMEM123Q8N131 208 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 C7orf34Q96L11 122 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 NSMCE2Q96MF7 247 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 MUS81Q96NY9 551 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 FNDC11Q9BVV2 318 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 MUC13Q9H3R2 512 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 NGBQ9NPG2 151 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 PRPF19Q9UMS4 504 aaKnown RBP16.25■□□□□ 0.19
CPSF2-202ENST00000553427 CCDC168Q8NDH2 2452 aa16.25■□□□□ 0.19
CPSF2-202ENST00000553427 OTOGQ6ZRI0 2925 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 SLC43A1O75387 559 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 OR7A10O76100 309 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 SEMG1P04279 462 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 DNAJA1P31689 397 aaKnown RBP16.24■□□□□ 0.19
CPSF2-202ENST00000553427 GABRA6Q16445 453 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 FBXW10Q5XX13 1052 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 CDH24Q86UP0 819 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 WFDC8Q8IUA0 241 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 FAM86B1Q8N7N1 296 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 PIK3C3Q8NEB9 887 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 PFN4Q8NHR9 129 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 ACOT11Q8WXI4 607 aaPredicted RBP16.24■□□□□ 0.19
CPSF2-202ENST00000553427 SGTBQ96EQ0 304 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 PYURFQ96I23 114 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 OR2M2Q96R28 347 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 PLEKHF2Q9H8W4 249 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 NDUFAF4Q9P032 175 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 MYO9AB2RTY4 2548 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 CREBBPQ92793 2442 aa16.24■□□□□ 0.19
CPSF2-202ENST00000553427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.23■□□□□ 0.19
CPSF2-202ENST00000553427 CIB4A0PJX0 185 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 ZNF587BE7ETH6 402 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 RPL36A-HNRNPH2H7BZ11 118 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 J3KTA2 159 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 OR6A2O95222 327 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 HIST1H2ABP04908 130 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 TSPAN19P0C672 248 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 ADORA3P0DMS8 318 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 HLA-DOBP13765 273 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 RHCEP18577 417 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 FOXG1P55316 489 aaPredicted RBP16.23■□□□□ 0.19
CPSF2-202ENST00000553427 SH3BGRP55822 239 aaPredicted RBP16.23■□□□□ 0.19
CPSF2-202ENST00000553427 IL1RL1Q01638 556 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 POU3F1Q03052 451 aaPredicted RBP16.23■□□□□ 0.19
CPSF2-202ENST00000553427 MTX3Q5HYI7 312 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 RINLQ6ZS11 566 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 HIST3H2AQ7L7L0 130 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 NANOGNBQ7Z5D8 188 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 RNF113BQ8IZP6 322 aaKnown RBP16.23■□□□□ 0.19
CPSF2-202ENST00000553427 LRRC17Q8N6Y2 441 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 NINJ1Q92982 152 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 HIST1H2ACQ93077 130 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 MUCL1Q96DR8 90 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 LRR1Q96L50 414 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 DHRS1Q96LJ7 313 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 C20orf141Q9NUB4 165 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 TAS2R5Q9NYW4 299 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 TAS2R1Q9NYW7 299 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 ACTR3BQ9P1U1 418 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 EDARQ9UNE0 448 aa16.23■□□□□ 0.19
CPSF2-202ENST00000553427 AKAP6Q13023 2319 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 A0A1W2PPR1 153 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 A0A1W2PRQ8 180 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 RAD51DO75771 328 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 ITGA2P17301 1181 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 YAP1P46937 504 aaKnown RBP16.22■□□□□ 0.19
CPSF2-202ENST00000553427 VLDLRP98155 873 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 DGCR6Q14129 220 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 PPA1Q15181 289 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 IQCCQ4KMZ1 466 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 PIK3IP1Q96FE7 263 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 ALKBH3Q96Q83 286 aaPredicted RBP16.22■□□□□ 0.19
CPSF2-202ENST00000553427 TMEM204Q9BSN7 226 aa16.22■□□□□ 0.19
CPSF2-202ENST00000553427 NMNAT1Q9HAN9 279 aaPredicted RBP16.22■□□□□ 0.19
CPSF2-202ENST00000553427 FAM32AQ9Y421 112 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms