RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 CD79AP11912 226 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 CCL2P13500 99 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 HSD3B1P14060 373 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 HSD3B2P26439 372 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 IER3P46695 156 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 PTDSS1P48651 473 aaKnown RBP11.19□□□□□ -0.62
SNRPF-203ENST00000551316 KLF3P57682 345 aaPredicted RBP11.19□□□□□ -0.62
SNRPF-203ENST00000551316 FGF12P61328 243 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 RPS23P62266 143 aaKnown RBP11.19□□□□□ -0.62
SNRPF-203ENST00000551316 CEACAM7Q14002 265 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 OR7A5Q15622 319 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 GSG1Q2KHT4 349 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 CLEC6AQ6EIG7 209 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 RGS7BPQ6MZT1 257 aaPredicted RBP11.19□□□□□ -0.62
SNRPF-203ENST00000551316 METTL2BQ6P1Q9 378 aaKnown RBP11.19□□□□□ -0.62
SNRPF-203ENST00000551316 PGBD2Q6P3X8 592 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 GRINAQ7Z429 371 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 KDM8Q8N371 416 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 TMEM234Q8WY98 164 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 ARL8AQ96BM9 186 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 STACQ99469 402 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
SNRPF-203ENST00000551316 TRIM5Q9C035 493 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 NMRK1Q9NWW6 199 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 TMED7Q9Y3B3 224 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
SNRPF-203ENST00000551316 A0A0U1RQK1 487 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 LIPT2A6NK58 231 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 CLDN24A6NM45 220 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 STX16-NPEPL1H3BU86 382 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 STX16O14662 325 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
SNRPF-203ENST00000551316 SPRY3O43610 288 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 TGDSO95455 350 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 HSPA4LO95757 839 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 OTCP00480 354 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 CSTAP01040 98 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 PATE4P0C8F1 98 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 ZNF250P15622 560 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 PGM1P36871 562 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 FRKP42685 505 aaPredicted RBP11.18□□□□□ -0.62
SNRPF-203ENST00000551316 GIPRP48546 466 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 CDK5R2Q13319 367 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 RAB39AQ14964 217 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 RASA2Q15283 850 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 DHRS7BQ6IAN0 325 aaPredicted RBP11.18□□□□□ -0.62
SNRPF-203ENST00000551316 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 KRT77Q7Z794 578 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 OR5D16Q8NGK9 328 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 SNX33Q8WV41 574 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 FAM71F1Q96KD3 344 aaPredicted RBP11.18□□□□□ -0.62
SNRPF-203ENST00000551316 SF3B5Q9BWJ5 86 aaKnown RBP11.18□□□□□ -0.62
SNRPF-203ENST00000551316 HOXD1Q9GZZ0 328 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 ZCCHC3Q9NUD5 404 aaKnown RBP11.18□□□□□ -0.62
SNRPF-203ENST00000551316 OSGIN1Q9UJX0 560 aa11.18□□□□□ -0.62
SNRPF-203ENST00000551316 CEACAM18A8MTB9 384 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 NPIPB8E9PQR5 432 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 FCMRO60667 390 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 UGT2B17O75795 530 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 CRABP2P29373 138 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
SNRPF-203ENST00000551316 EFNB2P52799 333 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 ARL4CP56559 192 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 GALK2Q01415 458 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 GPR68Q15743 365 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 ESCO2Q56NI9 601 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 PRAMEF8Q5VWM4 474 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 PRAMEF7Q5VXH5 474 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 SLC35E4Q6ICL7 350 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 C1orf122Q6ZSJ8 110 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 KLHDC1Q8N7A1 406 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 ZNF563Q8TA94 476 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 SYNPRQ8TBG9 265 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 SIGLEC11Q96RL6 698 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
SNRPF-203ENST00000551316 SEMA6AQ9H2E6 1030 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 GPATCH2Q9NW75 528 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 SIRT5Q9NXA8 310 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 TXNDC16Q9P2K2 825 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 SLC7A8Q9UHI5 535 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 TIMM22Q9Y584 194 aa11.17□□□□□ -0.62
SNRPF-203ENST00000551316 GOLGA6L22H0YM25 854 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 KLHL2O95198 593 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 SBK3P0C264 359 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 B4GALT1P15291 398 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 CLK1P49759 484 aaKnown RBP11.16□□□□□ -0.62
SNRPF-203ENST00000551316 MMP15P51511 669 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 AQP5P55064 265 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 CLDN17P56750 224 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 BST1Q10588 318 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 ZNF141Q15928 474 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 FAM83EQ2M2I3 478 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 GPR157Q5UAW9 335 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 C6orf89Q6UWU4 347 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 LDLRAD3Q86YD5 345 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 CMIPQ8IY22 773 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 CDADC1Q9BWV3 514 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 ADPRHL2Q9NX46 363 aa11.16□□□□□ -0.62
SNRPF-203ENST00000551316 RPUSD1Q9UJJ7 312 aaKnown RBP11.16□□□□□ -0.62
SNRPF-203ENST00000551316 CENPVL3A0A0U1RRI6 287 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms