RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 COL18A1P39060 1754 aa4.42□□□□□ -1.7
HCFC2-204ENST00000550335 RTL1A6NKG5 1358 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 PLEKHG2Q9H7P9 1386 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 WRBO00258 174 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 PSTPIP1O43586 416 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 LYPD3O95274 346 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 LGI1O95970 557 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 CST1P01037 141 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 IGHG4P01861 327 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 SERPIND1P05546 499 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 ANXA8P13928 327 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 RPS14P62263 151 aaKnown RBP4.41□□□□□ -1.7
HCFC2-204ENST00000550335 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 XKR7Q5GH72 579 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 ZNF658Q5TYW1 1059 aaPredicted RBP4.41□□□□□ -1.7
HCFC2-204ENST00000550335 ANXA8L1Q5VT79 327 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 FRA10AC1Q70Z53 315 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 NUDCD3Q8IVD9 361 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 SVOPLQ8N434 492 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 FTMTQ8N4E7 242 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 OR4K14Q8NGD5 310 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 SLC25A38Q96DW6 304 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 CNN2Q99439 309 aaKnown RBP4.41□□□□□ -1.7
HCFC2-204ENST00000550335 GFRA4Q9GZZ7 299 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 NT5MQ9NPB1 228 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 PITPNC1Q9UKF7 332 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 RPL36Q9Y3U8 105 aaKnown RBP4.41□□□□□ -1.7
HCFC2-204ENST00000550335 TTC41PQ6P2S7 1318 aa4.41□□□□□ -1.7
HCFC2-204ENST00000550335 A0A087WWV3 80 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 SRRM5B3KS81 715 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 H0YC42 278 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 K7ENP7 123 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 DCTN6O00399 190 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 HSD17B6O14756 317 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 PPP1R2P9O14990 202 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 ZNF354AO60765 605 aaPredicted RBP4.4□□□□□ -1.71
HCFC2-204ENST00000550335 STAMBPO95630 424 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 SLC2A5P22732 501 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 NTSP30990 170 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 PLK1P53350 603 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 PLP1P60201 277 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 SCRN3Q0VDG4 424 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 OR5I1Q13606 314 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 ARL6IP1Q15041 203 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 AANATQ16613 207 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 MICBQ29980 383 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 NSUN5P1Q3KNT7 163 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 CARD16Q5EG05 197 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 PAGE2BQ5JRK9 111 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 RAET1LQ5VY80 246 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 LRRC66Q68CR7 880 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 CENPQQ7L2Z9 268 aaPredicted RBP4.4□□□□□ -1.71
HCFC2-204ENST00000550335 ZNF571Q7Z3V5 609 aaPredicted RBP4.4□□□□□ -1.71
HCFC2-204ENST00000550335 TRPV1Q8NER1 839 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 SLC22A8Q8TCC7 542 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 STARD8Q92502 1023 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 NAT9Q9BTE0 207 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 RNF126Q9BV68 326 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 ACTR6Q9GZN1 396 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 NARFLQ9H6Q4 476 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 TREM2Q9NZC2 230 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 ABCD2Q9UBJ2 740 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 KLHL21Q9UJP4 597 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 FLVCR1Q9Y5Y0 555 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 PEX16Q9Y5Y5 336 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 MAP3K19Q56UN5 1328 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 INSRP06213 1382 aa4.4□□□□□ -1.71
HCFC2-204ENST00000550335 OVOS2A0A0G2JMS6 1433 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 PARP4Q9UKK3 1724 aaKnown RBP4.39□□□□□ -1.71
HCFC2-204ENST00000550335 IGHV3-35A0A0C4DH35 117 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 SMCO2A6NFE2 343 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 WWP2O00308 870 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 TBL1XO60907 577 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 CDH16O75309 829 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 FTH1P02794 183 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 ASGR1P07306 291 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 STSP08842 583 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 UBTFL1P0CB47 393 aaPredicted RBP4.39□□□□□ -1.71
HCFC2-204ENST00000550335 ZNF24P17028 368 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 MDH2P40926 338 aaKnown RBP4.39□□□□□ -1.71
HCFC2-204ENST00000550335 KIR2DS2P43631 304 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 CDH6P55285 790 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 ASPHQ12797 758 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 ALKBH6Q3KRA9 238 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 Q6ZN92 141 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 LUZP2Q86TE4 346 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 OR4F6Q8NGB9 312 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 CMTM7Q96FZ5 175 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 ATOH8Q96SQ7 321 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 CHP1Q99653 195 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 KLHDC3Q9BQ90 382 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 MRPL45Q9BRJ2 306 aaKnown RBP4.39□□□□□ -1.71
HCFC2-204ENST00000550335 SRXN1Q9BYN0 137 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 NCOR1P1Q9H4R4 102 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 PTGES2Q9H7Z7 377 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 PTTG3PQ9NZH4 202 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 FLT4P35916 1363 aa4.39□□□□□ -1.71
HCFC2-204ENST00000550335 SMG6Q86US8 1419 aaKnown RBP4.38□□□□□ -1.71
HCFC2-204ENST00000550335 NSD3Q9BZ95 1437 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms