RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ATP1B2P14415 290 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 GCFC2P16383 781 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 SERPINA2P20848 420 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 GNA11P29992 359 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 NMT1P30419 496 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 YWHABP31946 246 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 OTX1P32242 354 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 CCT6AP40227 531 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 LHX2P50458 406 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 APOC4P55056 127 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 ENPEPQ07075 957 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 SPAG1Q07617 926 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 MAB21L1Q13394 359 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 GK3PQ14409 553 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 CLEC2AQ6UVW9 174 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 CENPQQ7L2Z9 268 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 OTUD6AQ7L8S5 288 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 TMCO2Q7Z6W1 182 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 SLC35F2Q8IXU6 374 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 GTPBP8Q8N3Z3 284 aaPredicted RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 OR2L3Q8NG85 312 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 OR4D9Q8NGE8 314 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 STARD8Q92502 1023 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 MRPS31Q92665 395 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 TSNARE1Q96NA8 513 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 TGS1Q96RS0 853 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF670Q9BS34 389 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 TRIM62Q9BVG3 475 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 SLC17A9Q9BYT1 436 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 NAT10Q9H0A0 1025 aaKnown RBP2.21□□□□□ -2.06
CCDC38-208ENST00000549876 CLSTN2Q9H4D0 955 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 ANKRD19PQ9H560 264 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 NARFLQ9H6Q4 476 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 AZI2Q9H6S1 392 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 TMEM185BQ9H7F4 350 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 AUNIPQ9H7T9 357 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 NIPAL2Q9H841 368 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 USP16Q9Y5T5 823 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 PEX16Q9Y5Y5 336 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 SLIT3O75094 1523 aa2.21□□□□□ -2.06
CCDC38-208ENST00000549876 MROH5Q6ZUA9 1318 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 OR2AG2A6NM03 316 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 SPECC1L-ADORA2AF8WAN1 911 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CXCL13O43927 109 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CD5P06127 495 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF823P16415 610 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 TNNI1P19237 187 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 MAGP20916 626 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 GCAP28676 217 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CD1CP29017 333 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 KIR2DS2P43631 304 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 C21orf59P57076 290 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 RGS8P57771 180 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 PLP1P60201 277 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 RPS15P62841 145 aaKnown RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 VLDLRP98155 873 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ST3GAL3Q11203 375 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 HADHQ16836 314 aaKnown RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 FAM199XQ6PEV8 388 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 LUZP2Q86TE4 346 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 COMMD1Q8N668 190 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CATSPER1Q8NEC5 780 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 OR7G2Q8NG99 324 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 FAM81AQ8TBF8 368 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 DNAJA4Q8WW22 397 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 TRUB1Q8WWH5 349 aaKnown RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ELMO1Q92556 727 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 SLC38A4Q969I6 547 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 TM4SF19Q96DZ7 209 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 TIMD4Q96H15 378 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 IFT74Q96LB3 600 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CLCC1Q96S66 551 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CENPKQ9BS16 269 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ILKAPQ9H0C8 392 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF385DQ9H6B1 395 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 NHEJ1Q9H9Q4 299 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 NMRAL1Q9HBL8 299 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 POPDC2Q9HBU9 364 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 RPRD1BQ9NQG5 326 aaKnown RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 PSMC3IPQ9P2W1 217 aaPredicted RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 SLC7A8Q9UHI5 535 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF225Q9UK10 706 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ERVW-1Q9UQF0 538 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 CSDC2Q9Y534 153 aaKnown RBP2.2□□□□□ -2.06
CCDC38-208ENST00000549876 NINLQ9Y2I6 1382 aa2.2□□□□□ -2.06
CCDC38-208ENST00000549876 ARPC4-TTLL3A0A0A6YYG9 625 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 TRBV11-1A0A0K0K1C0 115 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 A0A1B0GTQ1 180 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 A0A1W2PPV9 198 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SMCO3A2RU48 225 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 A6NDX4 124 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 E7ESA3 106 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 K7N7A8 449 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 PRKYO43930 277 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 PFKFB2O60825 505 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 ATP5LO75964 103 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SLITRK3O94933 977 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 INSP01308 110 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 FTH1P02794 183 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms