RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 OR5B2Q96R09 309 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PANX1Q96RD7 426 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 HES4Q9HCC6 221 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 RBMX2Q9Y388 322 aaKnown RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TIMM22Q9Y584 194 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 KLF2Q9Y5W3 355 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 INPP4BO15327 924 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DYRK3O43781 588 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 WDR1O75083 606 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SCRG1O75711 98 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 OR2T7P0C7T2 308 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 GLRBP48167 497 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DIO1P49895 249 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 NPRL3Q12980 569 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ECH1Q13011 328 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ART3Q13508 389 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TP53BP2Q13625 1128 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 UBXN2BQ14CS0 331 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 LINC00303Q3SY05 128 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 THEM4Q5T1C6 240 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 CRIP3Q6Q6R5 217 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PAMR1Q6UXH9 720 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PM20D2Q8IYS1 436 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ENTHD1Q8IYW4 607 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 GPR137CQ8N3F9 429 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZBTB8BQ8NAP8 495 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ST6GALNAC3Q8NDV1 305 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 OR2T27Q8NH04 317 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF385AQ96PM9 386 aaKnown RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 BBS4Q96RK4 519 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 RASL10BQ96S79 203 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 EDEM2Q9BV94 578 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 UCK2Q9BZX2 261 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DNTTIP1Q9H147 329 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 MEPEQ9NQ76 525 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 CLN6Q9NWW5 311 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TAS2R5Q9NYW4 299 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PTTG2Q9NZH5 202 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 NPAP1Q9NZP6 1156 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 AKAP7Q9P0M2 348 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 A0A0G2JND7 137 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PTGES3LE9PB15 166 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 MS4A18H0YCH9 400 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TP53I11O14683 189 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 OR2B3O76000 313 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 RBP4P02753 201 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 C1QTNF9P0C862 333 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TRAPPC2P0DI81 140 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TRAPPC2BP0DI82 140 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 C8orf89P0DMQ9 161 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 MALP21145 153 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 UCP1P25874 307 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 NCBP2P52298 156 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SLC35A1P78382 337 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 CHRNB3Q05901 458 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 CDK5R2Q13319 367 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ZNHIT3Q15649 155 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TRIP6Q15654 476 aaKnown RBP4.36□□□□□ -1.71
SCAF11-212ENST00000549162 GPR68Q15743 365 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 EFNB3Q15768 340 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 MS4A18Q3C1V0 323 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 PVRIGQ6DKI7 326 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 MTFR2Q6P444 385 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SMARCD3Q6STE5 483 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DEF8Q6ZN54 512 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 Q7L0L9 218 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SLC16A9Q7RTY1 509 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SVOPQ8N4V2 548 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 SLC38A9Q8NBW4 561 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 FAM222BQ8WU58 562 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 DHRS9Q9BPW9 319 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 TTYH2Q9BSA4 534 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ENPP5Q9UJA9 477 aa4.36□□□□□ -1.71
SCAF11-212ENST00000549162 ELOA3CA0A087WX78 387 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ELOA3DA6NLF2 546 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 TAF4O00268 1085 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 SULT1B1O43704 296 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 TRAF3IP2O43734 574 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 PPP1R3DO95685 299 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 CLEC3BP05452 202 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 FOLR3P41439 243 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 DAP3P51398 398 aaKnown RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 SMSP52788 366 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 GFERP55789 205 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ACTA2P62736 377 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ACTG2P63267 376 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 CRMP1Q14194 572 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ZMYND11Q15326 602 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 P2RY14Q15391 338 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ELOA3BQ3SY89 546 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ATAD3BQ5T9A4 648 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 OR2W3Q7Z3T1 314 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 NUFIP2Q7Z417 695 aaKnown RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 RYBPQ8N488 228 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ZSCAN4Q8NAM6 433 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ELOA3Q8NG57 546 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 OR52R1Q8NGF1 315 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 ACOT12Q8WYK0 555 aa4.35□□□□□ -1.71
SCAF11-212ENST00000549162 MBD6Q96DN6 1003 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms