RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TOR1AIP2Q8NFQ8 470 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 METTL21AQ8WXB1 218 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 TMEM106AQ96A25 262 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 SMIM19Q96E16 107 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 NPAP1Q9NZP6 1156 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 A0A087WV62 115 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 KIR2DS5A0A0G2JLQ3 304 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 A0A0G2JNG1 304 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 POM121CA8CG34 1229 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 SHISA8B8ZZ34 492 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 KIR2DS3K7RE56 304 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 UBL4AP11441 157 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF24P17028 368 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ANXA7P20073 488 aaKnown RBP12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 PLA2G7Q13093 441 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 KIR2DS5Q14953 304 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 MEIOBQ8N635 442 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 OR11H7Q8NGC8 314 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF524Q96C55 264 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 RNF170Q96K19 258 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 GINS4Q9BRT9 223 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 G6PC3Q9BUM1 346 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 PDE7BQ9NP56 450 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ISYNA1Q9NPH2 558 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 GVINP1Q7Z2Y8 2422 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 H3BML4 177 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ERVH48-1M5A8F1 160 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ICOSLGO75144 302 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF780AO75290 641 aaPredicted RBP12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 LYPD3O95274 346 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 THBS2P35442 1172 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 CHMP1BQ7LBR1 199 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 OR5AK2Q8NH90 309 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 RTN4RQ9BZR6 473 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 SLITRK2Q9H156 845 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 TAS2R10Q9NYW0 307 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 POMT2Q9UKY4 750 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 SATB2Q9UPW6 733 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
PRPF40B-209ENST00000548825 DCDC2BA2VCK2 349 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 ZNF879B4DU55 563 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 TNFSF14O43557 240 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 CTNSO60931 367 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 SLC43A1O75387 559 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 HPXP02790 462 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 OR2T7P0C7T2 308 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 DNASE1P24855 282 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 RPL18Q07020 188 aaKnown RBP12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 DMKNQ6E0U4 476 aaPredicted RBP12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 PLPP7Q8NBV4 271 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 OR51D1Q8NGF3 324 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 OR2T27Q8NH04 317 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 NUDT22Q9BRQ3 303 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 MARVELD1Q9BSK0 173 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 KCNG2Q9UJ96 466 aa12.46□□□□□ -0.41
PRPF40B-209ENST00000548825 PRR19A6NJB7 356 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 UTS2O95399 124 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 AK1P00568 194 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 SERPINA3P01011 423 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 ARRB1P49407 418 aaPredicted RBP12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 CCDC157Q569K6 752 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 STPG1Q5TH74 334 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 LRFN4Q6PJG9 635 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 NPEPL1Q8NDH3 523 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 GPBAR1Q8TDU6 330 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 YIPF5Q969M3 257 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 FOXQ1Q9C009 403 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 LMAN1LQ9HAT1 526 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF337Q9Y3M9 751 aa12.46□□□□□ -0.42
PRPF40B-209ENST00000548825 TNFRSF10CO14798 259 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 SLC16A7O60669 478 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 S1PR1P21453 382 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 RBMS1P29558 406 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 SLC6A1P30531 599 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 BLKP51451 505 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 ACTA2P62736 377 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 ACTG2P63267 376 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 TMEM255AQ5JRV8 349 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 KIAA0895LQ68EN5 471 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 ZNF627Q7L945 461 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 TMED4Q7Z7H5 227 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 COMMD2Q86X83 199 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 OR2T4Q8NH00 348 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 LPAR4Q99677 370 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 CHRNA9Q9UGM1 479 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 ST6GALNAC2Q9UJ37 374 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 SCML1Q9UN30 329 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 MPZL1O95297 269 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 YPEL5P62699 121 aa12.45□□□□□ -0.42
PRPF40B-209ENST00000548825 SKP1P63208 163 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms