RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TPK1Q9H3S4 243 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 CACYBPQ9HB71 228 aaKnown RBP17.26■□□□□ 0.35
GATC-202ENST00000548171 B3GAT1Q9P2W7 334 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 ZNF443Q9Y2A4 671 aaPredicted RBP17.26■□□□□ 0.35
GATC-202ENST00000548171 FZD7O75084 574 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 GSNP06396 782 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 MSMBP08118 114 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 PRG2P13727 222 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 CREB1P16220 341 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 GPR6P46095 362 aaPredicted RBP17.25■□□□□ 0.35
GATC-202ENST00000548171 RPS5P46782 204 aaKnown RBP17.25■□□□□ 0.35
GATC-202ENST00000548171 UFM1P61960 85 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 C1DQ13901 141 aaKnown RBP17.25■□□□□ 0.35
GATC-202ENST00000548171 CHI3L2Q15782 390 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 CLIP4Q8N3C7 705 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 CLDND2Q8NHS1 167 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 FAM216AQ8WUB2 273 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 RDH5Q92781 318 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 PKNOX2Q96KN3 472 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 TEX37Q96LM6 180 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 SPATA9Q9BWV2 254 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 NUF2Q9BZD4 464 aa17.25■□□□□ 0.35
GATC-202ENST00000548171 MRPL37Q9BZE1 423 aaKnown RBP17.25■□□□□ 0.35
GATC-202ENST00000548171 LOC102725191A0A1B0GVB3 256 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 TMEM89A2RUT3 159 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 FAM157AC9JC47 383 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 AIM2O14862 343 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 BIRC5O15392 142 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 OR2T1O43869 369 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 SAGP10523 405 aaPredicted RBP17.24■□□□□ 0.35
GATC-202ENST00000548171 TMEM33P57088 247 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 MRPS11P82912 194 aaKnown RBP17.24■□□□□ 0.35
GATC-202ENST00000548171 EGR4Q05215 589 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 ELFN2Q5R3F8 820 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 C5orf46Q6UWT4 87 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 USP43Q70EL4 1123 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 SLC38A5Q8WUX1 472 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 GCDHQ92947 438 aaPredicted RBP17.24■□□□□ 0.35
GATC-202ENST00000548171 SLC35B4Q969S0 331 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 KTI12Q96EK9 354 aaPredicted RBP17.24■□□□□ 0.35
GATC-202ENST00000548171 OR2M2Q96R28 347 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 ZBTB18Q99592 522 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 MEAF6Q9HAF1 191 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 AIG1Q9NVV5 245 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 THUMPD1Q9NXG2 353 aaKnown RBP17.24■□□□□ 0.35
GATC-202ENST00000548171 B3GNT2Q9NY97 397 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 HAO1Q9UJM8 370 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 NOX1Q9Y5S8 564 aa17.24■□□□□ 0.35
GATC-202ENST00000548171 WDR91A4D1P6 747 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 TRIM77I1YAP6 450 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 RFXANKO14593 260 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 BCHEP06276 602 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 EGR1P18146 543 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 GLRXP35754 106 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 MVDP53602 400 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 NME5P56597 212 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 HILS1P60008 231 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 RPS23P62266 143 aaKnown RBP17.23■□□□□ 0.35
GATC-202ENST00000548171 GSG1Q2KHT4 349 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 TRMT5Q32P41 509 aaKnown RBP17.23■□□□□ 0.35
GATC-202ENST00000548171 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 NET1Q7Z628 596 aaPredicted RBP17.23■□□□□ 0.35
GATC-202ENST00000548171 SERPINA11Q86U17 422 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 TMEM123Q8N131 208 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 OR51F2Q8NH61 342 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 ZNF837Q96EG3 531 aaPredicted RBP17.23■□□□□ 0.35
GATC-202ENST00000548171 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 JMJD8Q96S16 334 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 SORT1Q99523 831 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 RBM4Q9BWF3 364 aaKnown RBP17.23■□□□□ 0.35
GATC-202ENST00000548171 C20orf27Q9GZN8 174 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 C12orf10Q9HB07 376 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 PCDHB10Q9UN67 800 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 IFT52Q9Y366 437 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 WNK2Q9Y3S1 2297 aa17.23■□□□□ 0.35
GATC-202ENST00000548171 TRAV20A0A0B4J274 112 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 A0A0G2JPF8 293 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 TMEM247A6NEH6 219 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 HNRNPCL2B2RXH8 293 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 HNRNPCL3B7ZW38 293 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 HNRNPCL1O60812 293 aaKnown RBP17.22■□□□□ 0.35
GATC-202ENST00000548171 HPXP02790 462 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 ALDOCP09972 364 aaKnown RBP17.22■□□□□ 0.35
GATC-202ENST00000548171 HNRNPCL4P0DMR1 293 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 ZNF35P13682 527 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 IL12AP29459 219 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 CRATP43155 626 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 SLC1A6P48664 564 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 DSTNP60981 165 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 FAM69AQ5T7M9 428 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 C6orf89Q6UWU4 347 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 H1FNTQ75WM6 255 aaPredicted RBP17.22■□□□□ 0.35
GATC-202ENST00000548171 GLB1L3Q8NCI6 653 aaPredicted RBP17.22■□□□□ 0.35
GATC-202ENST00000548171 DENND2DQ9H6A0 471 aaPredicted RBP17.22■□□□□ 0.35
GATC-202ENST00000548171 SEC14L4Q9UDX3 406 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 CHST2Q9Y4C5 530 aa17.22■□□□□ 0.35
GATC-202ENST00000548171 M0R082 166 aa17.21■□□□□ 0.35
GATC-202ENST00000548171 M0R3G1 203 aa17.21■□□□□ 0.35
GATC-202ENST00000548171 HLA-HP01893 362 aa17.21■□□□□ 0.35
GATC-202ENST00000548171 IL6P05231 212 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms