RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PCDHB14Q9Y5E9 798 aa17.66■□□□□ 0.42
SSH1-207ENST00000547862 M0R3G1 203 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 CLIC1O00299 241 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 GRPRP30550 384 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 NCALDP61601 193 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 HGFACQ04756 655 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 SNTB2Q13425 540 aaKnown RBP17.65■□□□□ 0.42
SSH1-207ENST00000547862 EFNB3Q15768 340 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 MDP1Q86V88 176 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 SLC38A4Q969I6 547 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 TAAR8Q969N4 342 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 OXGR1Q96P68 337 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 PAIP1Q9H074 479 aaKnown RBP17.65■□□□□ 0.42
SSH1-207ENST00000547862 TPK1Q9H3S4 243 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 CRLF2Q9HC73 371 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 A4GALTQ9NPC4 353 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 NKIRAS1Q9NYS0 192 aa17.65■□□□□ 0.42
SSH1-207ENST00000547862 IGHV2OR16-5A0A0B4J2B6 119 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 A0A1B0GWA3 101 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 HAX1O00165 279 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 AKAP8O43823 692 aaKnown RBP17.64■□□□□ 0.41
SSH1-207ENST00000547862 IGKV3-15P01624 115 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 ERCC1P07992 297 aaPredicted RBP17.64■□□□□ 0.41
SSH1-207ENST00000547862 DAOP14920 347 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 NQO1P15559 274 aaKnown RBP17.64■□□□□ 0.41
SSH1-207ENST00000547862 ZNF23P17027 643 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 NPR2P20594 1047 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 HTR2AP28223 471 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 CROCCP2Q86T23 111 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 COMTD1Q86VU5 262 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 CDK20Q8IZL9 346 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 GOLGA6L1Q8N7Z2 621 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 NUP37Q8NFH4 326 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 GTF2H4Q92759 462 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 ZNF317Q96PQ6 595 aaPredicted RBP17.64■□□□□ 0.41
SSH1-207ENST00000547862 SNX18Q96RF0 628 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 RAD21L1Q9H4I0 556 aa17.64■□□□□ 0.41
SSH1-207ENST00000547862 SERPINI2O75830 405 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 ZNF432O94892 652 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 STAMBPO95630 424 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 CD79AP11912 226 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 CBR1P16152 277 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 IL2RGP31785 369 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 STX1BP61266 288 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 MAGOHP61326 146 aaKnown RBP17.63■□□□□ 0.41
SSH1-207ENST00000547862 ADRM1Q16186 407 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 CR1LQ2VPA4 569 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 C3orf36Q3SXR2 165 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 ALG10BQ5I7T1 473 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 PHYHD1Q5SRE7 291 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 GCNT6Q5T4J0 391 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 FAM69AQ5T7M9 428 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 PIK3C3Q8NEB9 887 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 OR2M2Q96R28 347 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 EMC6Q9BV81 110 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 ZNF442Q9H7R0 627 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 SVEP1Q4LDE5 3571 aa17.63■□□□□ 0.41
SSH1-207ENST00000547862 IGKV1D-42A0A075B6H8 117 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 TRAV36DV7A0A075B6V5 113 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 TRAF3IP2O43734 574 aaPredicted RBP17.62■□□□□ 0.41
SSH1-207ENST00000547862 PAX7P23759 505 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 APEX1P27695 318 aaKnown RBP17.62■□□□□ 0.41
SSH1-207ENST00000547862 POU3F1Q03052 451 aaPredicted RBP17.62■□□□□ 0.41
SSH1-207ENST00000547862 FADDQ13158 208 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 CCNIQ14094 377 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 DAG1Q14118 895 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 C6orf89Q6UWU4 347 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 UEVLDQ8IX04 471 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 ZNF540Q8NDQ6 660 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 CKAP2Q8WWK9 683 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 NOX3Q9HBY0 568 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 MOV10Q9HCE1 1003 aaKnown RBP17.62■□□□□ 0.41
SSH1-207ENST00000547862 BCL2L10Q9HD36 194 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 KLHL14Q9P2G3 628 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 RAB21Q9UL25 225 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 USP22Q9UPT9 525 aa17.62■□□□□ 0.41
SSH1-207ENST00000547862 LYNX1G3V0Z9 82 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 RPL36A-HNRNPH2H7BZ11 118 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 HPRP00739 348 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 HLA-HP01893 362 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 LYNX1P0DP58 116 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 HLA-DOBP13765 273 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 AQP1P29972 269 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 RGS8P57771 180 aaPredicted RBP17.61■□□□□ 0.41
SSH1-207ENST00000547862 TRIP10Q15642 601 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 H1FNTQ75WM6 255 aaPredicted RBP17.61■□□□□ 0.41
SSH1-207ENST00000547862 TMEM123Q8N131 208 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 C10orf111Q8N326 155 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 C10orf53Q8N6V4 93 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 MS4A3Q96HJ5 214 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 ANKRD27Q96NW4 1050 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 MED29Q9NX70 200 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 SLC25A37Q9NYZ2 338 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 SELENONQ9NZV5 590 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 PRDM4Q9UKN5 801 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 USH1CQ9Y6N9 552 aa17.61■□□□□ 0.41
SSH1-207ENST00000547862 VSTM5A8MXK1 200 aa17.6■□□□□ 0.41
SSH1-207ENST00000547862 ZNF99A8MXY4 864 aaPredicted RBP17.6■□□□□ 0.41
SSH1-207ENST00000547862 OR2T1O43869 369 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms