RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 DNAJA4Q8WW22 397 aaPredicted RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 FAM168AQ92567 244 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 SLC47A1Q96FL8 570 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 SLC41A3Q96GZ6 507 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 TXNDC15Q96J42 360 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 KATNB1Q9BVA0 655 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 SPATA5L1Q9BVQ7 753 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 CA10Q9NS85 328 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.6□□□□□ -0.55
CPSF6-204ENST00000547486 PMF1-BGLAPU3KQ54 211 aa11.6□□□□□ -0.55
CPSF6-204ENST00000547486 CUBNO60494 3623 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 A0A0B4J2E0 115 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 A0A1B0GX12 115 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 A8MV72 311 aaPredicted RBP11.59□□□□□ -0.55
CPSF6-204ENST00000547486 EVPLLA8MZ36 301 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 LRRN3E7EW58 273 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 AIM2O14862 343 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 TRAF3IP2O43734 574 aaPredicted RBP11.59□□□□□ -0.55
CPSF6-204ENST00000547486 SLC43A1O75387 559 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 IGKV3-15P01624 115 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 CRYAAP02489 173 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 BGLAPP02818 100 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 BMP4P12644 408 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 HOXB1P14653 301 aaPredicted RBP11.59□□□□□ -0.55
CPSF6-204ENST00000547486 CBR1P16152 277 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 SLC25A16P16260 332 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 GTF2E2P29084 291 aaKnown RBP11.59□□□□□ -0.55
CPSF6-204ENST00000547486 CDH12P55289 794 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 SELPLGQ14242 412 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 SQLEQ14534 574 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 CEACAM16Q2WEN9 425 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 FAM91A1Q658Y4 838 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 VHLLQ6RSH7 139 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 C5orf46Q6UWT4 87 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 RETREG3Q86VR2 466 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 FAM169BQ8N8A8 192 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 SMYD1Q8NB12 490 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 RNF217Q8TC41 542 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 MOGAT1Q96PD6 335 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 SORCS2Q96PQ0 1159 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF317Q96PQ6 595 aaPredicted RBP11.59□□□□□ -0.55
CPSF6-204ENST00000547486 EMC6Q9BV81 110 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF385DQ9H6B1 395 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 CRLF2Q9HC73 371 aa11.59□□□□□ -0.55
CPSF6-204ENST00000547486 PRORSD1PA6NEY8 169 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 M0QX08 132 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 M0R3G1 203 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 SERPINB7O75635 380 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 SEC14L2O76054 403 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 OR4A8P0C604 315 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.56
CPSF6-204ENST00000547486 PCBP3P57721 371 aaKnown RBP11.58□□□□□ -0.56
CPSF6-204ENST00000547486 RGS8P57771 180 aaPredicted RBP11.58□□□□□ -0.56
CPSF6-204ENST00000547486 VLDLRP98155 873 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 IL1RL1Q01638 556 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 DUSP7Q16829 419 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 C6orf52Q5T4I8 152 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 CARD17Q5XLA6 110 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 LINC00114Q6XXX2 140 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 CXXC5Q7LFL8 322 aaKnown RBP11.58□□□□□ -0.56
CPSF6-204ENST00000547486 ARMC8Q8IUR7 673 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 GPR137CQ8N3F9 429 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 ANKS4BQ8N8V4 417 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 ADPRHL1Q8NDY3 354 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 HIPK4Q8NE63 616 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 GPR32P1Q8NGA4 272 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 OR6S1Q8NH40 331 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 DYDC1Q8WWB3 177 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 CKAP2Q8WWK9 683 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 PROX1Q92786 737 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF607Q96SK3 696 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 KCNS3Q9BQ31 491 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 TMEM27Q9HBJ8 222 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.56
CPSF6-204ENST00000547486 MED29Q9NX70 200 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 TESQ9UGI8 421 aaKnown RBP11.58□□□□□ -0.56
CPSF6-204ENST00000547486 CORO2BQ9UQ03 480 aa11.58□□□□□ -0.56
CPSF6-204ENST00000547486 VWC2LB2RUY7 222 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 M0R3H8 397 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 LYPD3O95274 346 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 THY1P04216 161 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 IGHV4-31P0DP07 118 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 NQO1P15559 274 aaKnown RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 PAX7P23759 505 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 THBS4P35443 961 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 IDH3GP51553 393 aaPredicted RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 MTPNP58546 118 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 EFNB3Q15768 340 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 NPTX1Q15818 432 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 WDR88Q6ZMY6 472 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 MDP1Q86V88 176 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 RBM45Q8IUH3 476 aaKnown RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 UEVLDQ8IX04 471 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 C20orf196Q8IYI0 205 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 ZCCHC24Q8N2G6 241 aaKnown RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 PIK3C3Q8NEB9 887 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms