RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 BHLHA9Q7RTU4 235 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 OR6F1Q8NGZ6 308 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 OR4K15Q8NH41 348 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 SPTSSAQ969W0 71 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 ACKR4Q9NPB9 350 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 GDE1Q9NZC3 331 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 VDAC3Q9Y277 283 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 GLCEO94923 617 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 CFIP05156 583 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 CD14P08571 375 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 THBS2P35442 1172 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 LUMP51884 338 aaPredicted RBP11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 NKX6-1P78426 367 aaPredicted RBP11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 NFATC4Q14934 902 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 DVL3Q92997 716 aaPredicted RBP11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 FBXO24O75426 580 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 CALCBP10092 127 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 RNF165Q6ZSG1 346 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 ZNF695Q8IW36 515 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 MS4A6EQ96DS6 147 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 TM7SF3Q9NS93 570 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 LUZP4Q9P127 313 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 STRCQ7RTU9 1775 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 LOC100289279A0A1B0GTE1 492 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 F5H5K5 113 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 H3BUI4 141 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 CHRM4P08173 479 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 IRS1P35568 1242 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 LIM2P55344 173 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 DUSP5Q16690 384 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 METRNLQ641Q3 311 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 RTL6Q6ICC9 239 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 SUMF2Q8NBJ7 301 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 ATF6BQ99941 703 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 EHFQ9NZC4 300 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 NUMA1Q14980 2115 aa11.29□□□□□ -0.6
NPC1L1-204ENST00000546276 A0A1W2PR48 441 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 IL33O95760 270 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 TIMP1P01033 207 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 TACR3P29371 465 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 AKR1C2P52895 323 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 EPHA5P54756 1037 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 EXOSC2Q13868 293 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 BCL2A1Q16548 175 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 CAMKMTQ7Z624 323 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 GLYATL2Q8WU03 294 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 SLC41A2Q96JW4 573 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 HDAC8Q9BY41 377 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 EFCAB7A8K855 629 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 M0QYG6 137 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 SURF4O15260 269 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 TXNL1O43396 289 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 THBS1P07996 1170 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 NID1P14543 1247 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 ALDH3B1P43353 468 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 TAS2R46P59540 309 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 RAB30Q15771 203 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 C12orf73Q69YU5 71 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 MR1Q95460 341 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 UCN3Q969E3 161 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 RRNAD1Q96FB5 475 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 WDFY2Q96P53 400 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 DHRS9Q9BPW9 319 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 RBM24Q9BX46 236 aaKnown RBP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 TSPAN10Q9H1Z9 355 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 NELFAQ9H3P2 528 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 FTSJ1Q9UET6 329 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 NTNG1Q9Y2I2 539 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 A0A1W2PS29 197 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 K7ESM1 405 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 UPK1AO00322 258 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 AADACL4Q5VUY2 407 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 KIAA1958Q8N8K9 716 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 OR51S1Q8NGJ8 323 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 ST8SIA4Q92187 359 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 MARC2Q969Z3 335 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 RASD2Q96D21 266 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 SLC35A4Q96G79 324 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 STACQ99469 402 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 ENY2Q9NPA8 101 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 SLAMF7Q9NQ25 335 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 PIAS3Q9Y6X2 628 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 PRAMEF26H0Y7S4 382 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 HNRNPKP61978 463 aaKnown RBP eCLIP11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 ERV3-1Q14264 604 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 P4HA3Q7Z4N8 544 aa11.28□□□□□ -0.6
NPC1L1-204ENST00000546276 RDH10Q8IZV5 341 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms