RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 EDARQ9UNE0 448 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 MYH14Q7Z406 1995 aaKnown RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 LOC100289279A0A1B0GTE1 492 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 FZD6O60353 706 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 SCRG1O75711 98 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 ATP1B1P05026 303 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CLDN6P56747 220 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF529Q6P280 563 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 FAM57BQ71RH2 274 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 NLGN4XQ8N0W4 816 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 ARHGAP9Q9BRR9 750 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 METTL17Q9H7H0 456 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-209ENST00000545689 PLEKHM1Q9Y4G2 1056 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 TAF1P21675 1872 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 TRAPPC2LH3BP13 241 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 EPHA5P54756 1037 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 GP2P55259 537 aaKnown RBP11.57□□□□□ -0.56
COL4A6-209ENST00000545689 MAT1AQ00266 395 aaKnown RBP11.57□□□□□ -0.56
COL4A6-209ENST00000545689 MC2RQ01718 297 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 FAHD1Q6P587 224 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CYHR1Q6ZMK1 362 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 LPLP06858 475 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CCR9P51686 369 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 HMGN3Q15651 99 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 PYCR3Q53H96 274 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 LPCAT3Q6P1A2 487 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 ADGRE4PQ86SQ3 457 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CLEC1AQ8NC01 280 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM59Q9BXS4 323 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 RLIMQ9NVW2 624 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 RAB22AQ9UL26 194 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CA5BQ9Y2D0 317 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 KRBOX1C9JBD0 128 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 NID1P14543 1247 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 SERPINA2P20848 420 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 ERV3-1Q14264 604 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 FCRL6Q6DN72 434 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 OR2L13Q8N349 312 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 PLEKHA3Q9HB20 300 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 TOR1AO14656 332 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 OR1D4P47884 311 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 DUSP8Q13202 625 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 IHHQ14623 411 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 MBTPS1Q14703 1052 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CTU2Q2VPK5 515 aaKnown RBP11.57□□□□□ -0.56
COL4A6-209ENST00000545689 IDO2Q6ZQW0 420 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 MOB3CQ70IA8 216 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CAMKMTQ7Z624 323 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 LMNTD1Q8N9Z9 388 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM106AQ96A25 262 aa11.57□□□□□ -0.56
COL4A6-209ENST00000545689 CMSS1Q9BQ75 279 aaKnown RBP11.57□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM184BQ9Y519 407 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-209ENST00000545689 OR5K3A6NET4 321 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 NUDT21O43809 227 aaKnown RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 PMS2P2O95744 297 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SSR4P51571 173 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 EPHA4P54764 986 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 OPCMLQ14982 345 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 ADIPOR2Q86V24 386 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 LILRA3Q8N6C8 439 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 AGBL5Q8NDL9 886 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 RHBDD1Q8TEB9 315 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 C22orf15Q8WYQ4 148 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 RAB3CQ96E17 227 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SLC25A21Q9BQT8 299 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 FAM227AF5H4B4 570 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 PIP5K1CO60331 668 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 EXOSC6Q5RKV6 272 aaKnown RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 GPR155Q7Z3F1 870 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 DAPP1Q9UN19 280 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 CXCL10P02778 98 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 APEX1P27695 318 aaKnown RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 TEAD1P28347 426 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 GRB2P62993 217 aaKnown RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF684Q5T5D7 378 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 COX15Q7KZN9 410 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SIAH3Q8IW03 269 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SLC7A5P1Q8MH63 180 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM68Q96MH6 324 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 MICU1Q9BPX6 476 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SPHK1Q9NYA1 384 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 MRPS28Q9Y2Q9 187 aaKnown RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 FBXO7Q9Y3I1 522 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 E9PI62 339 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 WDPCPO95876 746 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 IFNA10P01566 189 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 RAF1P04049 648 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 TK1P04183 234 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 ITGB2P05107 769 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SRMP19623 302 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 MSMO1Q15800 293 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 RSPO2Q6UXX9 243 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 SVBPQ8N300 66 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 GCDHQ92947 438 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-209ENST00000545689 MALSU1Q96EH3 234 aa11.56□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF681Q96N22 645 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms