RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 UNC119Q13432 240 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ZBTB6Q15916 424 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ZNF77Q15935 545 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 LINC00303Q3SY05 128 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ARMC3Q5W041 872 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 BTNL3Q6UXE8 466 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ZNF562Q6V9R5 426 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 MIER3Q7Z3K6 550 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 P4HA3Q7Z4N8 544 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 GOLGA7Q7Z5G4 137 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 Q8N9W7 124 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 MDS2Q8NDY4 140 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 OR9A1PQ8NGU1 263 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 OR9A4Q8NGU2 314 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 ST7LQ8TDW4 575 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 PHYHIPQ92561 330 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 CEP170P1Q96L14 293 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 TEKT3Q9BXF9 490 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 NMNAT2Q9BZQ4 307 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 CAB39LQ9H9S4 337 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 RBM28Q9NW13 759 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 GCNT4Q9P109 453 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 SAMD4AQ9UPU9 718 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 CENPEQ02224 2701 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 CRYBG3Q68DQ2 2970 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 TSC2P49815 1807 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 KIAA1549LQ6ZVL6 1849 aa2.56□□□□□ -2
SNHG1-224ENST00000545688 PDCD11Q14690 1871 aaKnown RBP2.56□□□□□ -2
SNHG1-224ENST00000545688 HIVEP1P15822 2718 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 ERICH2A1L162 156 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 CCER2I3L3R5 266 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 DLGAP1O14490 977 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 SLITRK3O94933 977 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 OLFM2O95897 454 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 IGLV3-19P01714 112 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 OR4Q2P0C623 313 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 SLC35G4P0C7Q5 338 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 CALM1P0DP23 149 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 CALM2P0DP24 149 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 CALM3P0DP25 149 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 RCC1P18754 421 aaPredicted RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 YWHABP31946 246 aaKnown RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 GCKP35557 465 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 TNNT3P45378 269 aaPredicted RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 NAPAP54920 295 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 APOC4P55056 127 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 CLDN6P56747 220 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 SEMG2Q02383 582 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 NCBP1Q09161 790 aaKnown RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 TRDNQ13061 729 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 AGKQ53H12 422 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 FAM120AOSQ5T036 256 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 NET1Q7Z628 596 aaPredicted RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 ARFGAP2Q8N6H7 521 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 TMEM252Q8N6L7 170 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 ZNF578Q96N58 590 aaPredicted RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 LINC00597Q9H2U6 94 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 KAT8Q9H7Z6 458 aaKnown RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 ZDHHC11Q9H8X9 412 aa2.55□□□□□ -2
SNHG1-224ENST00000545688 UBQLN1Q9UMX0 589 aaKnown RBP2.55□□□□□ -2
SNHG1-224ENST00000545688 NUP210Q8TEM1 1887 aaPredicted RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 MYO16Q9Y6X6 1858 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 IGLV4-60A0A075B6I1 120 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 ZSCAN5BA6NJL1 495 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 TMX2-CTNND1H3BSU7 103 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 HIP1O00291 1037 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 CHMP2AO43633 222 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 EFNA2O43921 213 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 TDP2O95551 362 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 KLF8O95600 359 aaPredicted RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 MAGP20916 626 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 NMT1P30419 496 aaKnown RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 KIR2DS2P43631 304 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 TUFMP49411 452 aaKnown RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 ACADVLP49748 655 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 EMDP50402 254 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 SUCLG1P53597 346 aaKnown RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 ARPP19P56211 112 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 HERVK_113P61574 105 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 TFDP1Q14186 410 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 SYPL1Q16563 259 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 ZSWIM7Q19AV6 140 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 SMU1Q2TAY7 513 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 CFAP221Q4G0U5 840 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 LRRC31Q6UY01 552 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 DLEU7Q6UYE1 221 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 DNM1P46Q6ZS02 220 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 OTUD6AQ7L8S5 288 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 ADAMTSL2Q86TH1 951 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 IFNEQ86WN2 208 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 EFCAB13Q8IY85 973 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 DEFB119Q8N690 84 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 LRRC17Q8N6Y2 441 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 OR10T2Q8NGX3 314 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 DTD2Q96FN9 168 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 GABRG3Q99928 467 aa2.54□□□□□ -2
SNHG1-224ENST00000545688 RSPO3Q9BXY4 272 aaPredicted RBP2.54□□□□□ -2
SNHG1-224ENST00000545688 TRIM4Q9C037 500 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms