RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	RP9	Q8TA86	221 aa	Known RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	BCL2L2	Q92843	193 aa	Predicted RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	LRR1	Q96L50	414 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	BDH2	Q9BUT1	245 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	POLR2J2	Q9GZM3	115 aa	Known RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	POLR2J3	Q9H1A7	115 aa	Known RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	FAIM	Q9NVQ4	179 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	CRNN	Q9UBG3	495 aa	Predicted RBP	11.73	□□□□□ -0.53
POLE-222	ENST00000545015	BAG5	Q9UL15	447 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	AP3M1	Q9Y2T2	418 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	NF1	P21359	2839 aa		11.73	□□□□□ -0.53
POLE-222	ENST00000545015	ZFHX3	Q15911	3703 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	LOC100653049	A0A140TA62	436 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	TRAPPC13	A5PLN9	417 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	FAM171A2	A8MVW0	826 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	FAM220BP	B1ANY3	271 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	SLC43A1	O75387	559 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	KRT33A	O76009	404 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	KRT34	O76011	436 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	IGF2	P01344	180 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	INHBB	P09529	407 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	C1D	Q13901	141 aa	Known RBP	11.72	□□□□□ -0.53
POLE-222	ENST00000545015	TBRG1	Q3YBR2	411 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	C9orf135	Q5VTT2	229 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF544	Q6NX49	715 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	ANKRD16	Q6P6B7	361 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	WDR88	Q6ZMY6	472 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	PXK	Q7Z7A4	578 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.72	□□□□□ -0.53
POLE-222	ENST00000545015	RBM45	Q8IUH3	476 aa	Known RBP	11.72	□□□□□ -0.53
POLE-222	ENST00000545015	PIK3C3	Q8NEB9	887 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	SLC26A7	Q8TE54	656 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	ADAMTS16	Q8TE57	1224 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	TRMT61A	Q96FX7	289 aa	Known RBP	11.72	□□□□□ -0.53
POLE-222	ENST00000545015		Q96MF0	132 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	MOGAT1	Q96PD6	335 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.72	□□□□□ -0.53
POLE-222	ENST00000545015	OR2M2	Q96R28	347 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	DHRS9	Q9BPW9	319 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	ASPN	Q9BXN1	380 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	NELFA	Q9H3P2	528 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	NOX1	Q9Y5S8	564 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015	USF3	Q68DE3	2245 aa		11.72	□□□□□ -0.53
POLE-222	ENST00000545015		A0A1W2PR80	420 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015		E7EQL1	145 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015		M0R1B8	84 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	PLPP3	O14495	311 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	CCDC22	O60826	627 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	HPR	P00739	348 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	IFNA14	P01570	189 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	TTK	P33981	857 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	ATP5J2	P56134	94 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	ROR2	Q01974	943 aa	Known RBP	11.71	□□□□□ -0.53
POLE-222	ENST00000545015	LGALS3BP	Q08380	585 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	PUDP	Q08623	228 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	ZP4	Q12836	540 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF74	Q16587	644 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	HIKESHI	Q53FT3	197 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	AGAP6	Q5VW22	663 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	C11orf71	Q6IPW1	123 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	HMBOX1	Q6NT76	420 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	KLHL24	Q6TFL4	600 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	ZNF627	Q7L945	461 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	ARPIN	Q7Z6K5	226 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	UEVLD	Q8IX04	471 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	C20orf196	Q8IYI0	205 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	DEPDC4	Q8N2C3	294 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	OR5J2	Q8NH18	312 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	PROX1	Q92786	737 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	GTPBP3	Q969Y2	492 aa	Known RBP	11.71	□□□□□ -0.53
POLE-222	ENST00000545015	PRSS27	Q9BQR3	290 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	FKRP	Q9H9S5	495 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	GPR35	Q9HC97	309 aa		11.71	□□□□□ -0.53
POLE-222	ENST00000545015	CPSF4L	A6NMK7	179 aa	Known RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	IGLV1-44	P01699	117 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	THRB	P10828	461 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	HLA-DOB	P13765	273 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	NQO1	P15559	274 aa	Known RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	KDELR2	P33947	212 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	RBM34	P42696	430 aa	Known RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	SPOCK1	Q08629	439 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	PMS2P3	Q13401	168 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	KRTAP21-3	Q3LHN1	58 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	TTC33	Q6PID6	262 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	SLC22A25	Q6T423	547 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	HACD2	Q6Y1H2	254 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	B3GLCT	Q6Y288	498 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	DNM1P46	Q6ZS02	220 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	CARM1	Q86X55	608 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	CCDC36	Q8IYA8	594 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	RNF217	Q8TC41	542 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	RCN3	Q96D15	328 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	HOPX	Q9BPY8	73 aa	Predicted RBP	11.7	□□□□□ -0.54
POLE-222	ENST00000545015	KATNB1	Q9BVA0	655 aa		11.7	□□□□□ -0.54
POLE-222	ENST00000545015	GSX1	Q9H4S2	264 aa	Predicted RBP	11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms