RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TAF11Q15544 211 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 C1orf94Q6P1W5 598 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NUFIP2Q7Z417 695 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TMEM179BQ7Z7N9 219 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR6K3Q8NGY3 331 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SSC4DQ8WTU2 575 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ITLN2Q8WWU7 325 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 STARD4Q96DR4 205 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TNFRSF13CQ96RJ3 184 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SEMA6AQ9H2E6 1030 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HIF3AQ9Y2N7 669 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NOX1Q9Y5S8 564 aa12.87□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PCNX1Q96RV3 2341 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 H3BNX3 289 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MRPL33O75394 65 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GASTP01350 101 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 F13BP05160 661 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HLA-DOBP13765 273 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF23P17027 643 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AGAP20933 346 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FPR3P25089 353 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CLDN17P56750 224 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PRPS1P60891 318 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZP4Q12836 540 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ANKDD1AQ495B1 522 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZBED5Q49AG3 693 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SHQ1Q6PI26 577 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CASP12Q6UXS9 341 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PXKQ7Z7A4 578 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LUZP2Q86TE4 346 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF100Q8IYN0 542 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RELL2Q8NC24 303 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LILRB4Q8NHJ6 448 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MOSPD2Q8NHP6 518 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GTPBP3Q969Y2 492 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF385AQ96PM9 386 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PIGMQ9H3S5 423 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NTN4Q9HB63 628 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PARPBPQ9NWS1 579 aa12.86□□□□□ -0.35
TNFRSF1A-216ENST00000543995 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 G3V2T6 193 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CLDN14O95500 239 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 UQCRC1P31930 480 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TSPAN31Q12999 210 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SLC25A35Q3KQZ1 300 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HMBOX1Q6NT76 420 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 EPHX4Q8IUS5 362 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HS3ST5Q8IZT8 346 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OR5K1Q8NHB7 308 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FANK1Q8TC84 345 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 APH1AQ96BI3 265 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CENPNQ96H22 339 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GPA33Q99795 319 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PKP2Q99959 881 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NDEL1Q9GZM8 345 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 OPN3Q9H1Y3 402 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FANCFQ9NPI8 374 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 KCNJ16Q9NPI9 418 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 INIPQ9NRY2 104 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
TNFRSF1A-216ENST00000543995 A0A1W2PRG6 482 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ARRDC5A6NEK1 342 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 KLF4O43474 513 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TRAF3IP2O43734 574 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 AKAP8O43823 692 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 BAG2O95816 211 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RNF224P0DH78 156 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IFNGR1P15260 489 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PRKACGP22612 351 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 GSSP48637 474 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 RPS4XP62701 263 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NIPAL3Q6P499 406 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 IGFN1Q86VF2 1251 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 HIPK1Q86Z02 1210 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZIC4Q8N9L1 334 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF610Q8N9Z0 462 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 TMEM45BQ96B21 275 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NRBF2Q96F24 287 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 FEVQ99581 238 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 ZNF556Q9HAH1 456 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MCCC2Q9HCC0 563 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MED29Q9NX70 200 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 SIGLEC7Q9Y286 467 aa12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 MAGED1Q9Y5V3 778 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-216ENST00000543995 CLEC18AA5D8T8 446 aa12.83□□□□□ -0.35
TNFRSF1A-216ENST00000543995 NKX2-6A6NCS4 301 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms