RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 UPK3AO75631 287 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 ZNF432O94892 652 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
RTN3-212ENST00000543123 AQP5P55064 265 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 NAAAQ02083 359 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 LGALS3BPQ08380 585 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 SCARB2Q14108 478 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 SQLEQ14534 574 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 ARMC8Q8IUR7 673 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 UEVLDQ8IX04 471 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 SCAIQ8N9R8 606 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 IL17RDQ8NFM7 739 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 OR6S1Q8NH40 331 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 ZNF417Q8TAU3 575 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 RNF217Q8TC41 542 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 HTRA1Q92743 480 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 TAAR8Q969N4 342 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 ZNF587Q96SQ5 575 aaPredicted RBP11.43□□□□□ -0.58
RTN3-212ENST00000543123 ASPNQ9BXN1 380 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 B3GAT2Q9NPZ5 323 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 TMEM160Q9NX00 188 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 LPAR3Q9UBY5 353 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 ANGPT4Q9Y264 503 aa11.43□□□□□ -0.58
RTN3-212ENST00000543123 FBN1P35555 2871 aaKnown RBP11.43□□□□□ -0.58
RTN3-212ENST00000543123 A0A096LPE4 126 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 IGLV1-44P01699 117 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 CECR9P0C854 216 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 CBR1P16152 277 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 GRPRP30550 384 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ARR3P36575 388 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 GZMKP49863 264 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ARF1P84077 181 aaKnown RBP11.42□□□□□ -0.58
RTN3-212ENST00000543123 EFNB3Q15768 340 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 AGKQ53H12 422 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 LINGO2Q7L985 606 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 FUNDC1Q8IVP5 155 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 KDM8Q8N371 416 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ZNF540Q8NDQ6 660 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 HIPK4Q8NE63 616 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 STON2Q8WXE9 905 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ANKRD27Q96NW4 1050 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 KCNK17Q96T54 332 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 VRK1Q99986 396 aaPredicted RBP11.42□□□□□ -0.58
RTN3-212ENST00000543123 EBF4Q9BQW3 602 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 CRLF2Q9HC73 371 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 GPR35Q9HC97 309 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 SLCO1B3Q9NPD5 702 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 VAPAQ9P0L0 249 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 TRIM33Q9UPN9 1127 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 USP22Q9UPT9 525 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 NOX1Q9Y5S8 564 aa11.42□□□□□ -0.58
RTN3-212ENST00000543123 ALPK2Q86TB3 2170 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 STAB1Q9NY15 2570 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 A0A087WUJ7 227 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 ZNF99A8MXY4 864 aaPredicted RBP11.41□□□□□ -0.58
RTN3-212ENST00000543123 GPRIN2O60269 458 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 OR4A8P0C604 315 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 FAM157CP0CG43 387 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 GPX2P18283 190 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 HTR2AP28223 471 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 CAPZA2P47755 286 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 PPOXP50336 477 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 LSM11P83369 360 aaKnown RBP eCLIP11.41□□□□□ -0.58
RTN3-212ENST00000543123 ADIPOQQ15848 244 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 CYP51A1Q16850 503 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 CEACAM16Q2WEN9 425 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 PAGE3Q5JUK9 113 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 TMEM123Q8N131 208 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 C11orf65Q8NCR3 313 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
RTN3-212ENST00000543123 LRR1Q96L50 414 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 OR2M2Q96R28 347 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 TMEM43Q9BTV4 400 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 BEX2Q9BXY8 128 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 SLAMF8Q9P0V8 285 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 LEF1Q9UJU2 399 aaPredicted RBP11.41□□□□□ -0.58
RTN3-212ENST00000543123 CUBNO60494 3623 aa11.41□□□□□ -0.58
RTN3-212ENST00000543123 FBN3Q75N90 2809 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 IGKV1D-42A0A075B6H8 117 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 TRBV5-3A0A0A0MS03 114 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 A0A1B0GX12 115 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 ANGPT2O15123 496 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 TRAF3IP2O43734 574 aaPredicted RBP11.4□□□□□ -0.58
RTN3-212ENST00000543123 FMO6PO60774 539 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 ENTPD5O75356 428 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
RTN3-212ENST00000543123 C8BP07358 591 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms