RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TRABD2BA6NFA1 517 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SMCHD1A6NHR9 2005 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 A6NJ64 397 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 EFCAB7A8K855 629 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 A8MUI8 341 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TCP10L2B9ZVM9 353 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 KRBOX1C9JBD0 128 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CLDN25C9JDP6 229 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 E7ESA3 106 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 KCNK1O00180 336 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SLC1A7O00341 560 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 PDXKO00764 312 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TCAPO15273 167 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 P2RX6O15547 441 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ADAM12O43184 909 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SGCEO43556 437 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 LANCL1O43813 399 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DFNA5O60443 496 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 UGT1A9O60656 530 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CIB2O75838 187 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SNAPC5O75971 98 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CEP152O94986 1710 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 FGF19O95750 216 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ANGPTL1O95841 491 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 PTTG1O95997 202 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CALCAP01258 141 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ZSCAN5DPP0CG00 497 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 THRAP10827 490 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 PSKH1P11801 424 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 HNF1AP20823 631 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 HNRNPA2B1P22626 353 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 CMA1P23946 247 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DPP4P27487 766 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 HTR2AP28223 471 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TEAD1P28347 426 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 NOS1P29475 1434 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ERP29P30040 261 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 PRDX2P32119 198 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CA5AP35218 305 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TAGLN2P37802 199 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 OMPP47874 163 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 LIMK2P53671 638 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TMEM50BP56557 158 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 OR2B6P58173 313 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 RPS8P62241 208 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 ARF6P62330 175 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ERVK-8P63133 956 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 REEP5Q00765 189 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 MGAT3Q09327 533 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 BST2Q10589 180 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 FUT7Q11130 342 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 BNIP2Q12982 314 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 MAB21L1Q13394 359 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ASAH1Q13510 395 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DIP2AQ14689 1571 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 PDK4Q16654 411 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DUSP5Q16690 384 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DEFB115Q30KQ5 88 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TRMT5Q32P41 509 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 ADPRMQ3LIE5 342 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 MOGAT2Q3SYC2 334 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SLC36A3Q495N2 470 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CDNFQ49AH0 187 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ZNF311Q5JNZ3 666 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 EOGTQ5NDL2 527 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ARMC12Q5T9G4 340 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 HACD4Q5VWC8 232 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 LIPJQ5W064 366 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CAPN13Q6MZZ7 669 aaPredicted RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 FAM199XQ6PEV8 388 aaPredicted RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 TTC37Q6PGP7 1564 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DOK6Q6PKX4 331 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 IZUMO2Q6UXV1 221 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 CERS6Q6ZMG9 384 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SNX20Q7Z614 316 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ARPINQ7Z6K5 226 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 BIVMQ86UB2 503 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 MYPOPQ86VE0 399 aaPredicted RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 ZNF440Q8IYI8 595 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 SLC35F6Q8N357 371 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 STX19Q8N4C7 294 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 ZNF561Q8N587 486 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 EIF4E3Q8N5X7 224 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 BANPQ8N9N5 519 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 OR1M1Q8NGA1 313 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 AKR7LQ8NHP1 331 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 C8orf46Q8TAG6 207 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 RAET1EQ8TD07 263 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 LKAAEAR1Q8TD35 194 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TSEN15Q8WW01 171 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 SMPDL3AQ92484 453 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 NT5C3BQ969T7 300 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TMEM45BQ96B21 275 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 S100PBPQ96BU1 408 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 TLCD1Q96CP7 247 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 DUS3LQ96G46 650 aaKnown RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 ZNF514Q96K75 400 aaPredicted RBP2.72□□□□□ -1.97
USP28-210ENST00000542033 C2orf48Q96LS8 159 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 FOXN4Q96NZ1 517 aa2.72□□□□□ -1.97
USP28-210ENST00000542033 NEDD4LQ96PU5 975 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms