RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 ACTA1P68133 377 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 PRAMEF8Q5VWM4 474 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 PRAMEF7Q5VXH5 474 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 CACUL1Q86Y37 369 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 ACOT4Q8N9L9 421 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 LINC01555Q8NAE3 123 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 HAVCR1Q96D42 359 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 ZNF764Q96H86 408 aaPredicted RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 FBXO34Q9NWN3 711 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 TRAPPC13A5PLN9 417 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 RFPL4AA6NLU0 287 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 RFPL4AL1F8VTS6 287 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 UBBP0CG47 229 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 UBCP0CG48 685 aaKnown RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 P2RY2P41231 377 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 RPS27AP62979 156 aaKnown RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 UBA52P62987 128 aaKnown RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 SRSF3P84103 164 aaKnown RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 ZNF765Q7L2R6 523 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 DCUN1D3Q8IWE4 304 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 OR2L2Q8NH16 312 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 ZNF471Q9BX82 626 aaPredicted RBP13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 ACTRT3Q9BYD9 372 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 KCNK15Q9H427 330 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 BIN3Q9NQY0 253 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 ASF1BQ9NVP2 202 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 PCDHB10Q9UN67 800 aa13.59□□□□□ -0.23
AC005840.4-201ENST00000541242 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 PEX12O00623 359 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 KCNAB3O43448 404 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 EIF3GO75821 320 aaKnown RBP eCLIP13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 SNAPC5O75971 98 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 CA3P07451 260 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 ADRA2CP18825 462 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 S100A12P80511 92 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 DPTQ07507 201 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 KRT33BQ14525 404 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 KCNAB1Q14722 419 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 LY6G6FQ5SQ64 297 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 RPL22L1Q6P5R6 122 aaKnown RBP13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 UNQ9370/PRO34162Q6UXP9 181 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 ERN2Q76MJ5 926 aaKnown RBP13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 SLC16A13Q7RTY0 426 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 GLB1L2Q8IW92 636 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 SLC35F2Q8IXU6 374 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 EID2Q8N6I1 236 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 OR7G2Q8NG99 324 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 SMARCD2Q92925 531 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 CRB3Q9BUF7 120 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 CALML5Q9NZT1 146 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 ADAM29Q9UKF5 820 aa13.58□□□□□ -0.23
AC005840.4-201ENST00000541242 PRR32B1ATL7 298 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 SULT1B1O43704 296 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 RBBP9O75884 186 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 RPP14O95059 124 aaKnown RBP13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 ZFPL1O95159 310 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 LYPD3O95274 346 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 BDKRB2P30411 391 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 BCL6P41182 706 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 PPIAP62937 165 aaKnown RBP13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 TMEM52BQ4KMG9 183 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 JMJD6Q6NYC1 403 aaPredicted RBP13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 OR14A16Q8NHC5 309 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 LINC00615Q96LM1 132 aaPredicted RBP13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 C10orf90Q96M02 699 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 LGR4Q9BXB1 951 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 DPEP2Q9H4A9 486 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 EXO5Q9H790 373 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 ALPK2Q86TB3 2170 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 SZT2Q5T011 3432 aa13.58□□□□□ -0.24
AC005840.4-201ENST00000541242 A0A1B0GVT2 93 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 A0A1B0GW55 424 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 TMEM218A2RU14 115 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 TBC1D3BA6NDS4 549 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 FAM171A2A8MVW0 826 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 CCSO14618 274 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 GLSO94925 669 aaPredicted RBP13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 DUX4L2P0CJ85 424 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 DUX4L3P0CJ86 424 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 DUX4L4P0CJ87 422 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 DUX4L5P0CJ88 424 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 DUX4L6P0CJ89 424 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 DUX4L7P0CJ90 424 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 GTF2F2P13984 249 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 FOSL1P15407 271 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 HIST1H1CP16403 213 aaKnown RBP13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 HIST1H1TP22492 207 aaPredicted RBP13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 RFC3P40938 356 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 GPM6BQ13491 265 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 MRPL2Q5T653 305 aaKnown RBP13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 NUP210LQ5VU65 1888 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 TANGO2Q6ICL3 276 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 RANBP3LQ86VV4 465 aaPredicted RBP13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 MIB2Q96AX9 1013 aa13.57□□□□□ -0.24
AC005840.4-201ENST00000541242 CNN2Q99439 309 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms