RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 WISP1O95388 367 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 CBX7O95931 251 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 RLN2P04090 185 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 GJA4P35212 333 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARF3P61204 181 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 DYRK1AQ13627 763 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 ATXN7L3Q14CW9 347 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PRICKLE4Q2TBC4 344 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 CMIPQ8IY22 773 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR4C16Q8NGL9 310 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 AMELYQ99218 206 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 RPP25Q9BUL9 199 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 PLA2G2FQ9BZM2 168 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 TMEM138Q9NPI0 162 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 INPP5EQ9NRR6 644 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 V9GY05 133 aa9.47□□□□□ -0.89
CDC42SE1-207ENST00000540998 FREM3P0C091 2139 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 FANCMQ8IYD8 2048 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 LOC100509620A0A075B734 347 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 GSTZ1O43708 216 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 CREBL2O60519 120 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 CSN2P05814 226 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 APEHP13798 732 aaKnown RBP9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 NAGAP17050 411 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 ACHEP22303 614 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 MAT1AQ00266 395 aaKnown RBP9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 SORDQ00796 357 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 PSG6Q00889 435 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 MGAT2Q10469 447 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 METTL11BQ5VVY1 283 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 LIPNQ5VXI9 398 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 ARHGAP11AQ6P4F7 1023 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 STAC2Q6ZMT1 411 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 MUC20Q8N307 709 aaPredicted RBP9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 OR51D1Q8NGF3 324 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 WNT2BQ93097 391 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 PAWRQ96IZ0 340 aaKnown RBP9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 CYYR1Q96J86 154 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 MOGAT1Q96PD6 335 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 SLC17A9Q9BYT1 436 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 PILRAQ9UKJ1 303 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 IKZF2Q9UKS7 526 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 LHX6Q9UPM6 363 aa9.46□□□□□ -0.89
CDC42SE1-207ENST00000540998 A0A1B0GUH1 482 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 ANKRD20A5PA0PJZ0 165 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 GABARAPH6UMI1 98 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 OIP5O43482 229 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 EGFP01133 1207 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 IFNGP01579 166 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 APOC3P02656 99 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2T7P0C7T2 308 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACTC1P68032 377 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 ACTA1P68133 377 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 RGS7BPQ6MZT1 257 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 TMEM205Q6UW68 189 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 FAM219AQ8IW50 185 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 RNF113BQ8IZP6 322 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR51S1Q8NGJ8 323 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR9A4Q8NGU2 314 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2T27Q8NH04 317 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 KXD1Q9BQD3 176 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 APOOQ9BUR5 198 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 TTYH1Q9H313 450 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 WDR76Q9H967 626 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 FRRS1LQ9P0K9 344 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 FBXO4Q9UKT5 387 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 ICAM5Q9UMF0 924 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 FREM2Q5SZK8 3169 aa9.46□□□□□ -0.9
CDC42SE1-207ENST00000540998 PRSS38A1L453 326 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR2M5A3KFT3 312 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 GALR3O60755 368 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TGM6O95932 706 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 GPR18Q14330 331 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TRAM1Q15629 374 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 DEFB115Q30KQ5 88 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 RPL22L1Q6P5R6 122 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 C11orf88Q6PI97 169 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 FIGLAQ6QHK4 219 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 USP53Q70EK8 1073 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 SLC35D2Q76EJ3 337 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 CDRT4Q8N9R6 151 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 TOR1AIP2Q8NFQ8 470 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR52H1Q8NGJ2 320 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 FLVCR1-AS1Q8TAF5 88 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 DUSP19Q8WTR2 217 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 MARVELD3Q96A59 401 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 PTDSS2Q9BVG9 487 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 EXOSC3Q9NQT5 275 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 ENTPD2Q9Y5L3 495 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 KIF26BQ2KJY2 2108 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 CCSO14618 274 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 OR10H2O60403 315 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 CTNSO60931 367 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 NDUFB2O95178 105 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 SERPINA3P01011 423 aa9.45□□□□□ -0.9
CDC42SE1-207ENST00000540998 CELA2BP08218 269 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms