RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 OAFQ86UD1 273 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 UBQLNLQ8IYU4 475 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 LNX2Q8N448 690 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 TMEM99Q8N816 258 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 OR4Q3Q8NH05 313 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 FNDC9Q8TBE3 224 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 SMPDL3BQ92485 455 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 OSTF1Q92882 214 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 WNT2BQ93097 391 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 TMEM45BQ96B21 275 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 SDCCAG3Q96C92 435 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 HRASLS5Q96KN8 279 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 SNX18Q96RF0 628 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 TNFRSF13CQ96RJ3 184 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 DDOQ99489 341 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 TAPBPLQ9BX59 468 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 LDAHQ9H6V9 325 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 EGLN3Q9H6Z9 239 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 ENOPH1Q9UHY7 261 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 RASD1Q9Y272 281 aa9.4□□□□□ -0.9
VPS33A-204ENST00000540669 FREM1Q5H8C1 2179 aa9.4□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF724A8MTY0 619 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 AHRRA9YTQ3 701 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 NPIPA2E9PIF3 369 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 NPIPA3F8WFD2 350 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 IMPA2O14732 288 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 ZNHIT1O43257 154 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 SS18L1O75177 396 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-204ENST00000540669 AKR7A3O95154 331 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 RCBTB2O95199 551 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 SOX14O95416 240 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 SNAP29O95721 258 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 TGM6O95932 706 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 CD14P08571 375 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 HOXD4P09016 255 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-204ENST00000540669 FCGR2AP12318 317 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 HLA-DOBP13765 273 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 POU2F1P14859 743 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 GABRA1P14867 456 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 POLR2IP36954 125 aaKnown RBP9.39□□□□□ -0.91
VPS33A-204ENST00000540669 AQP2P41181 271 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 EIF1AXP47813 144 aaKnown RBP9.39□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF133P52736 654 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-204ENST00000540669 CRISP1P54107 249 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 RAD23AP54725 363 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 PER3P56645 1201 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 CARD18P57730 90 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 NPRL3Q12980 569 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 KEAP1Q14145 624 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 PON3Q15166 354 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 SNCBQ16143 134 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 PGGHGQ32M88 737 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 WLSQ5T9L3 541 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 RRM2BQ7LG56 351 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 CD163Q86VB7 1156 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 TMEM123Q8N131 208 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 ATP6V1C2Q8NEY4 427 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 MAGEE2Q8TD90 523 aaPredicted RBP9.39□□□□□ -0.91
VPS33A-204ENST00000540669 FBLIM1Q8WUP2 373 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 DMRTA2Q96SC8 542 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 ASPNQ9BXN1 380 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 TOR3AQ9H497 397 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 CALHM2Q9HA72 323 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 KIF17Q9P2E2 1029 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 RCE1Q9Y256 329 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 NOX1Q9Y5S8 564 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 FLVCR1Q9Y5Y0 555 aa9.39□□□□□ -0.91
VPS33A-204ENST00000540669 ADGRG4Q8IZF6 3080 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 FIGNL2A6NMB9 653 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 CENPBD1B2RD01 187 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 H0YAE9 185 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 SLC19A2O60779 497 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TOXO94900 526 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 STSP08842 583 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 GABRB1P18505 474 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 SLC6A6P31641 620 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 CEACAM8P31997 349 aaPredicted RBP9.38□□□□□ -0.91
VPS33A-204ENST00000540669 NTF4P34130 210 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 GRK5P34947 590 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 GIPRP48546 466 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 OR2B6P58173 313 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 PTGES3Q15185 160 aaKnown RBP9.38□□□□□ -0.91
VPS33A-204ENST00000540669 TAF11Q15544 211 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 HIST3H3Q16695 136 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 LRRC36Q1X8D7 754 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 ALG10Q5BKT4 473 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 MESTQ5EB52 335 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 IZUMO2Q6UXV1 221 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 DPY19L2P2Q6ZN68 376 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 CREB3L2Q70SY1 520 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 FCRLAQ7L513 359 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 DOLPP1Q86YN1 238 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 CCDC103Q8IW40 242 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 CDK20Q8IZL9 346 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 MARVELD2Q8N4S9 558 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 OR9K2Q8NGE7 335 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 OR51A7Q8NH64 312 aa9.38□□□□□ -0.91
VPS33A-204ENST00000540669 ABHD3Q8WU67 409 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms