RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HPRP00739 348 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 TSPAN19P0C672 248 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 RAP2AP10114 183 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 IFI30P13284 250 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 NQO1P15559 274 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 RRM2P31350 389 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 UQCRC1P31930 480 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 CCKARP32238 428 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 NTF4P34130 210 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 LIMS1P48059 325 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 PCYT1AP49585 367 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 RPS4XP62701 263 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 SORDQ00796 357 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 SPIBQ01892 262 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 PRKCDQ05655 676 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 CHRNB3Q05901 458 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 PUDPQ08623 228 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 FOXD4Q12950 439 aaPredicted RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 SEC23BQ15437 767 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 MS4A18Q3C1V0 323 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 FAM98BQ52LJ0 330 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 FGD3Q5JSP0 725 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 TMEM225Q6GV28 225 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 PODNL1Q6PEZ8 512 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 TBPL2Q6SJ96 375 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 CASP12Q6UXS9 341 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF730Q6ZMV8 503 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 MBOAT2Q6ZWT7 520 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 CREB3L2Q70SY1 520 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 H1FNTQ75WM6 255 aaPredicted RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 NANOGNBQ7Z5D8 188 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 EPHX4Q8IUS5 362 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 NRMQ8IXM6 262 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 RNF113BQ8IZP6 322 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 KDM8Q8N371 416 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 C10orf53Q8N6V4 93 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 LRRC17Q8N6Y2 441 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ZIC4Q8N9L1 334 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF610Q8N9Z0 462 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 OR5J2Q8NH18 312 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 CANT1Q8WVQ1 401 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 LIPHQ8WWY8 451 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 RNASE6Q93091 150 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 BPIFA2Q96DR5 249 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 SGTBQ96EQ0 304 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 OXGR1Q96P68 337 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF385AQ96PM9 386 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF347Q96SE7 839 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 RBM24Q9BX46 236 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ENKD1Q9H0I2 346 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 NANSQ9NR45 359 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 MALT1Q9UDY8 824 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 FOXD3Q9UJU5 478 aaPredicted RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 NOSIPQ9Y314 301 aaKnown RBP6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 ALPK2Q86TB3 2170 aa6.18□□□□□ -1.42
LPCAT3-209ENST00000540060 UNC79Q9P2D8 2635 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 SH3PXD2BA1X283 911 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 HTR3EA5X5Y0 456 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 PLPP3O14495 311 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 CDC42EP2O14613 210 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 MRPL33O75394 65 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF432O94892 652 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 CNOT4O95628 575 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ADORA3P0DMS8 318 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 UMPSP11172 480 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 HLA-DOBP13765 273 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 POU2F1P14859 743 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ZNF43P17038 809 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 HOXB6P17509 224 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 FUT1P19526 365 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 COX5AP20674 150 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 MAKP20794 623 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 COL8A1P27658 744 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 CD79BP40259 229 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 GPR4P46093 362 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ERFP50548 548 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 SMIM11AP58511 58 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 POU3F1Q03052 451 aaPredicted RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 RPL18Q07020 188 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 ZP4Q12836 540 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 PMS2P3Q13401 168 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 FHL1Q13642 323 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 HIST2H2BCQ6DN03 193 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 NHLRC1Q6VVB1 395 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 Q6ZT83 130 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 TMPRSS11FQ6ZWK6 438 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 YTHDF3Q7Z739 585 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 STK32CQ86UX6 486 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 SPATA24Q86W54 205 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 MEX3DQ86XN8 651 aaKnown RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 UEVLDQ8IX04 471 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 DMRTC2Q8IXT2 367 aaPredicted RBP6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 GABRG1Q8N1C3 465 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 OR4K5Q8NGD3 323 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 OR52J3Q8NH60 311 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 SLCO4A1Q96BD0 722 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 APH1AQ96BI3 265 aa6.17□□□□□ -1.42
LPCAT3-209ENST00000540060 LRRC46Q96FV0 321 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms