RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CDK6Q00534 326 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 EFNB3Q15768 340 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 DHRS4L2Q6PKH6 230 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 EPGNQ6UW88 154 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 H1FNTQ75WM6 255 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 KDM8Q8N371 416 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 LSMEM1Q8N8F7 131 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 ADPRHL1Q8NDY3 354 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 NUP37Q8NFH4 326 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 NFKBIDQ8NI38 313 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF417Q8TAU3 575 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 SPDL1Q96EA4 605 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 KTI12Q96EK9 354 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 SORCS2Q96PQ0 1159 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF587Q96SQ5 575 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 TMBIM4Q9HC24 238 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 DYNLRB1Q9NP97 96 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 CRNNQ9UBG3 495 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.32□□□□□ -0.28
UBE3B-211ENST00000539843 ANGPT4Q9Y264 503 aa13.32□□□□□ -0.28
UBE3B-211ENST00000539843 A0A096LNT2 108 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 A0A1B0GWA3 101 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 ENTPD5O75356 428 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 IGKV3-15P01624 115 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 ARAFP10398 606 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 CBR1P16152 277 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 NPR2P20594 1047 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 GRPRP30550 384 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 LSP1P33241 339 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 NR4A2P43354 598 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 MRPL19P49406 292 aaKnown RBP13.31□□□□□ -0.28
UBE3B-211ENST00000539843 IDH3GP51553 393 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-211ENST00000539843 TUBA1BP68363 451 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 TUBA4AP68366 448 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 ARF1P84077 181 aaKnown RBP13.31□□□□□ -0.28
UBE3B-211ENST00000539843 LGALS3BPQ08380 585 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 NPRL3Q12980 569 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 CEACAM16Q2WEN9 425 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 TUBA1AQ71U36 451 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 MAVSQ7Z434 540 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 OR6S1Q8NH40 331 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 NEU4Q8WWR8 484 aaPredicted RBP13.31□□□□□ -0.28
UBE3B-211ENST00000539843 TLCD1Q96CP7 247 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 PTDSS2Q9BVG9 487 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 RABEP2Q9H5N1 569 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF442Q9H7R0 627 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 CRLF2Q9HC73 371 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 CCDC167Q9P0B6 97 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 SPEF1Q9Y4P9 236 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 ATRQ13535 2644 aa13.31□□□□□ -0.28
UBE3B-211ENST00000539843 CR1P17927 2039 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 LOC100289279A0A1B0GTE1 492 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF726A6NNF4 738 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF99A8MXY4 864 aaPredicted RBP13.3□□□□□ -0.28
UBE3B-211ENST00000539843 LY6HO94772 140 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 IGLV1-44P01699 117 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 IGHV4-31P0DP07 118 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 SRD5A1P18405 259 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 EGR4Q05215 589 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 SCARB2Q14108 478 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 ADIPOQQ15848 244 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 BLOC1S3Q6QNY0 202 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 ARMC8Q8IUR7 673 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 SCAIQ8N9R8 606 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 PLK3Q9H4B4 646 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 CHODLQ9H9P2 273 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 GPR35Q9HC97 309 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 POFUT2Q9Y2G5 429 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 NOX1Q9Y5S8 564 aa13.3□□□□□ -0.28
UBE3B-211ENST00000539843 LOC102725191A0A1B0GVB3 256 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 hCG_2039718K7EN88 272 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 M0R3G1 203 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 OR6A2O95222 327 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 C8BP07358 591 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 POU3F1Q03052 451 aaPredicted RBP13.29□□□□□ -0.28
UBE3B-211ENST00000539843 PMS2P3Q13401 168 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
UBE3B-211ENST00000539843 AGBL2Q5U5Z8 902 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 SPATA21Q7Z572 469 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 ANKS4BQ8N8V4 417 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 HIPK4Q8NE63 616 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 OR6N1Q8NGY5 312 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 TAAR8Q969N4 342 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 TMEM38AQ9H6F2 299 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 KLHL14Q9P2G3 628 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 FBXL3Q9UKT7 428 aa13.29□□□□□ -0.28
UBE3B-211ENST00000539843 HEATR1Q9H583 2144 aaKnown RBP13.28□□□□□ -0.28
UBE3B-211ENST00000539843 A0A087WUJ7 227 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 PHF1O43189 567 aaPredicted RBP13.28□□□□□ -0.28
UBE3B-211ENST00000539843 ZNF432O94892 652 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 RAB36O95755 333 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 CBLP22681 906 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 ATP4BP51164 291 aa13.28□□□□□ -0.28
UBE3B-211ENST00000539843 AQP5P55064 265 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms