RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PSMB10P40306 273 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 WASP42768 502 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 GRK6P43250 576 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 CBFBQ13951 182 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 PRRT3Q5FWE3 981 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 CTRB2Q6GPI1 263 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 MTFR2Q6P444 385 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ENPP7Q6UWV6 458 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ZAR1Q86SH2 424 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF227Q86WZ6 799 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF595Q8IYB9 648 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 OR51L1Q8NGJ5 315 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 SEC22CQ9BRL7 303 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 AIFM2Q9BRQ8 373 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 REG4Q9BYZ8 158 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 CHIAQ9BZP6 476 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 SLC17A5Q9NRA2 495 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 HIF3AQ9Y2N7 669 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TMEM14AQ9Y6G1 99 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TBC1D3DA0A087WVF3 549 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TMEM212A6NML5 194 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TTLL8A6PVC2 850 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TBC1D3LB9A6J9 549 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ADAM11O75078 769 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 EML2O95834 649 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TXNDC12O95881 172 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 MELTFP08582 738 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TBC1D3HP0C7X1 549 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 S1PR1P21453 382 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 NUP62P37198 522 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ACTR1BP42025 376 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 NANOS3P60323 173 aaKnown RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ACTR1AP61163 376 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 SKP1P63208 163 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 EGR3Q06889 387 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TBC1D3CQ6IPX1 549 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 JAZF1Q86VZ6 243 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TBC1D3Q8IZP1 549 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TMEM52Q8NDY8 209 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 OR6N1Q8NGY5 312 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 OR1E3Q8WZA6 343 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 FAM3CQ92520 227 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 RGP1Q92546 391 aaPredicted RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 PAWRQ96IZ0 340 aaKnown RBP12.11□□□□□ -0.47
UBE3B-209ENST00000539584 VSTM2LQ96N03 204 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 TTTY10Q9BZA0 68 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 COMMD4Q9H0A8 199 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 SFXN1Q9H9B4 322 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 STEAP1Q9UHE8 339 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 OPN4Q9UHM6 478 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 ADAM18Q9Y3Q7 739 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 PCDHGA5Q9Y5G8 931 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 KCNMB2Q9Y691 235 aa12.11□□□□□ -0.47
UBE3B-209ENST00000539584 A0A0J9YY10 115 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF860A6NHJ4 632 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 A8MXK9 166 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CDK2AP1O14519 115 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 NARSO43776 548 aaKnown RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SUSD5O60279 629 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF254O75437 659 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 UPK3AO75631 287 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CD14P08571 375 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 RASGEF1BQ0VAM2 473 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 COL9A2Q14055 689 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 HLXQ14774 488 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CHMP1BQ7LBR1 199 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SLC36A1Q7Z2H8 476 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 HSD17B13Q7Z5P4 300 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 KRT77Q7Z794 578 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CSNK1A1LQ8N752 337 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ADAMTS18Q8TE60 1221 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CCDC74AQ96AQ1 378 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 TOE1Q96GM8 510 aaKnown RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SHARPINQ9H0F6 387 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SLC25A18Q9H1K4 315 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CA10Q9NS85 328 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 TMEM74BQ9NUR3 256 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CYB5R1Q9UHQ9 305 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 TRBV5-7A0A0A0MS05 114 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 LINC01553A4QN01 128 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 OR6C74A6NCV1 312 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SERINC4A6NH21 518 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ANXA2P2A6NMY6 339 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SLC31A1O15431 190 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 PRAMEF2O60811 474 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SCO1O75880 301 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 WDPCPO95876 746 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 CSTAP01040 98 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ANXA2P07355 339 aaKnown RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 NMBP08949 121 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 GABRA1P14867 456 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 ANXA7P20073 488 aaKnown RBP12.1□□□□□ -0.47
UBE3B-209ENST00000539584 SDHAP31040 664 aa12.1□□□□□ -0.47
UBE3B-209ENST00000539584 DCTDP32321 178 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms