RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
CDH13-204ENST00000539548 ADRA2CP18825 462 aa8.83□□□□□ -1
CDH13-204ENST00000539548 MAPK3P27361 379 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 DLX5P56178 289 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SCAND1P57086 179 aa8.83□□□□□ -1
CDH13-204ENST00000539548 PRPS1P60891 318 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SEC61A1P61619 476 aaKnown RBP8.83□□□□□ -1
CDH13-204ENST00000539548 RPS4XP62701 263 aaKnown RBP8.83□□□□□ -1
CDH13-204ENST00000539548 RPS15P62841 145 aaKnown RBP8.83□□□□□ -1
CDH13-204ENST00000539548 ERVK-25P63136 954 aa8.83□□□□□ -1
CDH13-204ENST00000539548 OR5M10Q6IEU7 315 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TBC1D3CQ6IPX1 549 aa8.83□□□□□ -1
CDH13-204ENST00000539548 LRRN1Q6UXK5 716 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SLC16A9Q7RTY1 509 aa8.83□□□□□ -1
CDH13-204ENST00000539548 SPRED2Q7Z698 418 aa8.83□□□□□ -1
CDH13-204ENST00000539548 LRRTM1Q86UE6 522 aa8.83□□□□□ -1
CDH13-204ENST00000539548 TBC1D3Q8IZP1 549 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 OR4N2Q8NGD1 307 aa8.83□□□□□ -1
CDH13-204ENST00000539548 ASB12Q8WXK4 309 aa8.83□□□□□ -1
CDH13-204ENST00000539548 FAM3CQ92520 227 aa8.83□□□□□ -1
CDH13-204ENST00000539548 PNPLA2Q96AD5 504 aa8.83□□□□□ -1
CDH13-204ENST00000539548 RASD2Q96D21 266 aa8.83□□□□□ -1
CDH13-204ENST00000539548 KLHL15Q96M94 604 aa8.83□□□□□ -1
CDH13-204ENST00000539548 ZNF578Q96N58 590 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 GPX7Q96SL4 187 aaPredicted RBP8.83□□□□□ -1
CDH13-204ENST00000539548 ALG12Q9BV10 488 aa8.83□□□□□ -1
CDH13-204ENST00000539548 CAPN10Q9HC96 672 aa8.83□□□□□ -1
CDH13-204ENST00000539548 GDE1Q9NZC3 331 aa8.83□□□□□ -1
CDH13-204ENST00000539548 RWDD3Q9Y3V2 267 aa8.83□□□□□ -1
CDH13-204ENST00000539548 A6NCN8 305 aa8.82□□□□□ -1
CDH13-204ENST00000539548 C5orf67F2Z3F1 127 aa8.82□□□□□ -1
CDH13-204ENST00000539548 SUSD5O60279 629 aa8.82□□□□□ -1
CDH13-204ENST00000539548 UPK3AO75631 287 aa8.82□□□□□ -1
CDH13-204ENST00000539548 EGFP01133 1207 aa8.82□□□□□ -1
CDH13-204ENST00000539548 NMBP08949 121 aa8.82□□□□□ -1
CDH13-204ENST00000539548 PTHLHP12272 177 aa8.82□□□□□ -1
CDH13-204ENST00000539548 S100A11P31949 105 aa8.82□□□□□ -1
CDH13-204ENST00000539548 MAP2K6P52564 334 aa8.82□□□□□ -1
CDH13-204ENST00000539548 SLC25A1P53007 311 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ADPRHP54922 357 aa8.82□□□□□ -1
CDH13-204ENST00000539548 PSMD4P55036 377 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 RAB38P57729 211 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ALKBH1Q13686 389 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 TCEA2Q15560 299 aa8.82□□□□□ -1
CDH13-204ENST00000539548 CSRP2Q16527 193 aa8.82□□□□□ -1
CDH13-204ENST00000539548 TMUB2Q71RG4 321 aa8.82□□□□□ -1
CDH13-204ENST00000539548 RNF44Q7L0R7 432 aa8.82□□□□□ -1
CDH13-204ENST00000539548 RD3Q7Z3Z2 195 aa8.82□□□□□ -1
CDH13-204ENST00000539548 GLB1L2Q8IW92 636 aa8.82□□□□□ -1
CDH13-204ENST00000539548 EXD3Q8N9H8 876 aa8.82□□□□□ -1
CDH13-204ENST00000539548 OR10G6Q8NH81 332 aa8.82□□□□□ -1
CDH13-204ENST00000539548 OR5AK2Q8NH90 309 aa8.82□□□□□ -1
CDH13-204ENST00000539548 CCL4L1Q8NHW4 92 aa8.82□□□□□ -1
CDH13-204ENST00000539548 BAHD1Q8TBE0 780 aaPredicted RBP8.82□□□□□ -1
CDH13-204ENST00000539548 SCARB1Q8WTV0 552 aa8.82□□□□□ -1
CDH13-204ENST00000539548 HMGB4Q8WW32 186 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ADAD1Q96M93 576 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 TSPAN10Q9H1Z9 355 aaPredicted RBP8.82□□□□□ -1
CDH13-204ENST00000539548 COQ3Q9NZJ6 369 aa8.82□□□□□ -1
CDH13-204ENST00000539548 SCML1Q9UN30 329 aa8.82□□□□□ -1
CDH13-204ENST00000539548 MOKQ9UQ07 419 aa8.82□□□□□ -1
CDH13-204ENST00000539548 LINC01553A4QN01 128 aa8.82□□□□□ -1
CDH13-204ENST00000539548 H7C417 338 aa8.82□□□□□ -1
CDH13-204ENST00000539548 PYCARD-AS1I3L0S3 204 aa8.82□□□□□ -1
CDH13-204ENST00000539548 PSMD9O00233 223 aa8.82□□□□□ -1
CDH13-204ENST00000539548 XRCC3O43542 346 aa8.82□□□□□ -1
CDH13-204ENST00000539548 FOXS1O43638 330 aa8.82□□□□□ -1
CDH13-204ENST00000539548 OR10H2O60403 315 aa8.82□□□□□ -1
CDH13-204ENST00000539548 RBBP9O75884 186 aa8.82□□□□□ -1
CDH13-204ENST00000539548 RGS11O94810 467 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ZNF432O94892 652 aa8.82□□□□□ -1
CDH13-204ENST00000539548 VSIG10L2P0DP72 767 aa8.82□□□□□ -1
CDH13-204ENST00000539548 CSRP1P21291 193 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 ITPKBP27987 946 aa8.82□□□□□ -1
CDH13-204ENST00000539548 FAUP35544 74 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 NUP62P37198 522 aaPredicted RBP8.82□□□□□ -1
CDH13-204ENST00000539548 ACTR1BP42025 376 aa8.82□□□□□ -1
CDH13-204ENST00000539548 CDKN2AP42771 156 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 LSSP48449 732 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ACTR1AP61163 376 aa8.82□□□□□ -1
CDH13-204ENST00000539548 FAM53BQ14153 422 aa8.82□□□□□ -1
CDH13-204ENST00000539548 NFATC4Q14934 902 aa8.82□□□□□ -1
CDH13-204ENST00000539548 FAAP20Q6NZ36 180 aa8.82□□□□□ -1
CDH13-204ENST00000539548 LEG1Q6P5S2 330 aa8.82□□□□□ -1
CDH13-204ENST00000539548 OVCH2Q7RTZ1 564 aa8.82□□□□□ -1
CDH13-204ENST00000539548 FAM220AQ7Z4H9 259 aa8.82□□□□□ -1
CDH13-204ENST00000539548 NAXDQ8IW45 347 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ZNF595Q8IYB9 648 aa8.82□□□□□ -1
CDH13-204ENST00000539548 ZNF511Q8NB15 262 aa8.82□□□□□ -1
CDH13-204ENST00000539548 WDR89Q96FK6 387 aaPredicted RBP8.82□□□□□ -1
CDH13-204ENST00000539548 PAWRQ96IZ0 340 aaKnown RBP8.82□□□□□ -1
CDH13-204ENST00000539548 WDR92Q96MX6 357 aa8.82□□□□□ -1
CDH13-204ENST00000539548 VSTM2LQ96N03 204 aa8.82□□□□□ -1
CDH13-204ENST00000539548 LINC00052Q96N35 136 aa8.82□□□□□ -1
CDH13-204ENST00000539548 SLC19A3Q9BZV2 496 aa8.82□□□□□ -1
CDH13-204ENST00000539548 SHARPINQ9H0F6 387 aa8.82□□□□□ -1
CDH13-204ENST00000539548 WSB2Q9NYS7 404 aaPredicted RBP8.82□□□□□ -1
CDH13-204ENST00000539548 FRRS1LQ9P0K9 344 aa8.82□□□□□ -1
CDH13-204ENST00000539548 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
CDH13-204ENST00000539548 MRM2Q9UI43 246 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms